KEGG   Citrobacter rodentium: ROD_46661
Entry
ROD_46661         CDS       T01145                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
cro  Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:cro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cro03016]
    ROD_46661 (truB)
Enzymes [BR:cro01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     ROD_46661 (truB)
Transfer RNA biogenesis [BR:cro03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ROD_46661 (truB)
 Prokaryotic type
    ROD_46661 (truB)
SSDB
Motif
Pfam: TruB_N TruB-C_2 TruB_C_2
Other DBs
NCBI-ProteinID: CBG91360
UniProt: D2TQ08
LinkDB
Position
4923430..4924374
AA seq 314 aa
MSRPRRRGRDINGVLLLDKPQGMSSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPITFTPEQLASALETFRGDIE
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVIFLRRLAVSKYPVERMVTLERLRELADQAEQQGIPAAQLLDPL
LMPMDSPASDFPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGEEGKFIGMGEIDDE
GRVAPRRLVVDYPA
NT seq 945 nt   +upstreamnt  +downstreamnt
atgagtcgtcctcgtcgtcgtggtcgcgacattaacggcgtcctgctgctggataagccg
cagggcatgtccagcaatgacgtactgcaaaaagtaaaacgtctctacaacgcgaaccgt
gccggacacaccggcgcgctggacccgctggcgaccggtatgctgccgatttgtctcggc
gaagcgaccaagttttcacagtacctgctggactccgacaagcgttatcgggtgattgcc
cgtctcgggcagcggaccgatacctccgatgccgacggacagatcgtgcaggagcgccca
ataacctttacccctgagcagcttgctagcgcgctggaaacctttcgcggcgacattgag
caggtcccgtcgatgtactcggcgctgaaatatcagggtaaaaagctttatgaatacgcg
cgccaggggattgaagtcccgcgtgaggcgcgaccgattaccgtttatgagctactgttt
attcgccacgaagggaacgaactggagctggaagtgcactgttcgaaaggcacctatatt
cgcacgatcgtcgacgatctgggtgaaaaactgggttgcggcgcgcacgttatcttcctg
cgccgcctggcggtaagcaaatacccggtcgagcggatggtgacgctggaacgcctgcgc
gagctggcggaccaggctgagcagcagggtattccggcagcgcaactgctggacccgcta
ttgatgccaatggacagtccggcttcggatttccctgtcgtcaatctgccgttaacctct
tccgtttactttaaaaacggcaacccggtgcgtacgtcgggcgcgccgctggaagggctg
gtacgcgtaacggaaggtgaagagggtaaatttatcggcatgggcgaaattgacgacgaa
ggccgcgtcgccccgcgccggttagtggtggactatcctgcgtaa

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