Citrobacter rodentium: ROD_46881
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Entry
ROD_46881 CDS
T01145
Symbol
gatR
Name
(GenBank) galactitol utilisation operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_46881 (gatR)
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ROD_46881 (gatR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
HTH_5
CoA_trans
AIRS
CggR_N
DsrD
HTH_PafC
HTH_12
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CBG91381
UniProt:
D2TQ29
LinkDB
All DBs
Position
complement(4944295..4945068)
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AA seq
257 aa
AA seq
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MNSFERRNKIVDLINTQGSVLVLDLSNIFGISEVTIRADLRLLEEKGLVTRFHGGAAKPG
SHLAEGDNQEVILEDRYQLASDPKKRIAQAAAAMVNEGMTVILDSGSTTLLIAEALNRKS
NITVITNSLPAAFTLSDNKDLTLVVCGGTVRHKTHSMHGTIAERSLHGISADLMFVGADG
IDATNGITTFNEGYSISGVMAAAAHKVVAVLDATKFNRRGFNQVLSMDKINCVITDDGIS
KQDKAALEKTGVELLIV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaactcatttgagagaaggaacaaaattgtcgacctgattaatacgcaggggagcgta
ctggtgctggatctttcgaatatctttggaatttctgaagtcaccatccgtgccgacctg
cgtttgctggaggagaagggtctggtcacgcgctttcacggcggcgcggcaaaacccggt
agccatctggcggaaggcgataatcaggaagtgatactcgaagatcgttaccagcttgcc
agcgatccgaaaaagcggattgcccaggcggcagcggcaatggtgaacgaaggcatgacc
gtgatcctcgacagcggcagcaccacgttactgatcgctgaggcgttgaaccgtaaaagc
aatatcaccgtcatcaccaacagcttaccggcggcctttaccctgtccgacaataaagac
ctgacgctggtggtttgcggcggtacggtgcggcataaaacgcactccatgcacggcacc
attgccgaacgctccctgcatggcatcagcgccgacctgatgtttgtcggcgcggacggt
atcgacgcgacaaacggcatcaccacctttaacgaaggctattcgatcagcggcgtgatg
gccgccgccgcgcacaaagtggtggccgtactggatgcgacaaagtttaaccgtcgcggg
tttaaccaggtgctgtcgatggataagattaactgcgtaattaccgatgacggtatcagc
aagcaggataaagccgcgctggaaaaaacaggggttgaactgctgattgtttaa
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