Citrobacter rodentium: ROD_49431
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Entry
ROD_49431 CDS
T01145
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cro
Citrobacter rodentium
Pathway
cro00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ROD_49431 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cro01007
]
ROD_49431 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cro03016
]
ROD_49431 (lysS)
Enzymes [BR:
cro01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ROD_49431 (lysS)
Amino acid related enzymes [BR:
cro01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ROD_49431 (lysS)
Transfer RNA biogenesis [BR:
cro03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ROD_49431 (lysS)
Prokaryotic type
Other AARSs
ROD_49431 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CBG91624
UniProt:
D2TSR0
LinkDB
All DBs
Position
5204030..5205547
Genome browser
AA seq
505 aa
AA seq
DB search
MSEQHAQGADAVADLNNELKTRREKLAGLREQGIAFPNDFRRDHTSDQLHADFDGKENEE
LEALNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDLGD
ILGAKGKLFKTKTGELSVHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKIRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMAELDNFDSAKAIAESIGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacacgcacagggcgctgacgcggtagctgaccttaacaatgaactgaaa
acgcgccgcgagaaactggcaggcctgcgcgagcaggggattgccttcccgaacgatttc
cgtcgcgatcatacctcagaccaactgcatgctgacttcgacgggaaagagaacgaagag
ctggaagcgctgaacgttgaagtctccgttgctggccgaatgatgacccgccgtattatg
ggcaaggcctcctttgttacgttgcaggacgttggcggccgcattcagctgtacgttgcc
cgcgacgatctgccggaaggcatttacaacgagcagttcaagaagtgggacctgggcgat
atcctcggcgcgaagggcaagctgttcaagacgaaaaccggcgagctgtctgttcactgc
accgagctgcgcctgctgaccaaagcgctgcgcccgctgccggacaagttccacggcctg
caggatcaggaagcgcgctaccgtcagcgctatctggacctcatctctaacgatgaatcg
cgtaatacctttaagatccgctcgcagattctggcggggattcgccagttcatggtgggt
cgcggctttatggaagttgaaaccccgatgatgcaggtgattccgggcggggcgtccgcg
cgtccgtttatcacccatcacaatgcgttggatctcgacatgtacctgcgtattgcgccg
gaactgtatctgaagcgtctggtggtcggcggcttcgagcgcgtgtttgaaatcaaccgt
aacttccgtaacgaagggatctccgtacgtcataaccctgagttcaccatgatggaactc
tacatggcgtatgcggactacaaagatctgatcgaactgaccgagtcgctgttccgtacg
ctggcgcaggacgttctcggcaccactcaggttccttacggcgatgaagtcttcgacttc
ggcaaaccgttcgaaaaactgaccatgcgcgaagcgatcaagaagtaccgtccggaaacg
gatatggccgaactggataacttcgactccgcaaaagcgattgctgaatctatcggcatt
aaggttgagaagagctggggtctgggccgtatcgtgaccgagatcttcgaagaagtggcg
gaagcgcatctgattcagccgacctttattaccgagtatccggctgaggtatcaccgctg
gcgcgccgtaacgatgtgaacccggaaattaccgatcgcttcgagttcttcatcggtggt
cgcgaaatcggtaacggctttagcgagctgaacgatgcggaagatcaggcccagcgtttc
caggatcaggttgatgcgaaagcggcgggtgacgatgaagcgatgttcttcgatgaagac
tacgtgaccgcgctggagcatggtctgccgccgacggcgggtctggggattggtatcgac
cgtatggtgatgctgttcaccaacagccacaccatccgcgatgtgatcctgttcccggcg
atgcgtccggttaagtaa
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