Citrobacter rodentium: ROD_50221
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Entry
ROD_50221 CDS
T01145
Symbol
speC
Name
(GenBank) ornithine decarboxylase, constitutive
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cro
Citrobacter rodentium
Pathway
cro00330
Arginine and proline metabolism
cro00480
Glutathione metabolism
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ROD_50221 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ROD_50221 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ROD_50221 (speC)
Enzymes [BR:
cro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ROD_50221 (speC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CBG91695
UniProt:
D2TSX3
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All DBs
Position
5273026..5275161
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AA seq
711 aa
AA seq
DB search
MKSMNIAASSELVSRLSTHRGVVALDSTDFTDVAAVVLTVADSRSGILTLLKRTGFQLPV
FILTDEIIDAPAGVMAIIRGNEQEWLELDAAARQYEENLLPPFYDTLVQYVAMGNSTFAC
PGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVRLGDLLIHEGSAKHAQKFAAKVFH
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDEHCFHEEYLRSQIRQAVPEKADDPRPFRLAIIQLGTYDGTIYNARQVIDKIG
HLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG
IEARKAILAGCKLIQPFIPPEVEGKAWQDYPTATIARERRFFSFEPGAKWHGFAGYADDQ
YFVDPCKLLLTTPGIDAETGRYTDFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES
AEKMAHLVAMLAQFERHIEDDTPLAEVLPSIFNKYPQRYRDYTLRALCQEMHDLYVSFAV
KDLQKAMFRQESLPQVAMNPQDANSAFIRGEVELVRISEAEGRIAAEGALPYPPGVLCVV
PGEVWGGAVQRYFLALEEGVNMLPGFSPELQGVYSEKDADGIKRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatgaacattgccgccagtagtgaactggtttctcgtttatctactcaccgt
ggcgtcgtggcgctggacagtaccgactttaccgatgtcgccgccgttgtgctgaccgta
gccgacagccgtagcggcattcttacgttgctgaagcgcaccggctttcaactgccggta
tttatactgacagatgagataatcgatgcgcccgcgggtgttatggcgatcattcgcggc
aatgagcaggagtggctggagctggatgccgccgctcgtcagtatgaagaaaatctgctg
ccgccgttttacgacacccttgtacagtatgtggcgatgggcaacagcacctttgcctgt
ccggggcatcagcatggcgcattttttaaaaagcatcctgccggtcgccatttctacgac
ttttttggcgagaatgttttccgcgcggatatgtgcaacgccgacgtcaggctgggcgat
ttactgatccacgaaggctcggccaaacatgcgcaaaagttcgcggcgaaagtctttcat
gccgataaaacctattttgtgctgaatggcacctcggcggccaataaggttgtgacgaat
gcgctgctgacgcggggcgatctggtgctgttcgatcgcaataatcacaagtcgaaccat
catggcgcgctgatccaggccggagcgaccccggtgtatctggaggcggcgcgcaatccg
tttggttttatcggcggcattgatgagcactgttttcacgaagagtacctgcgctcgcag
attcggcaagcggtgccagagaaagccgacgacccgcgtccgttccgcctggcgatcatc
cagcttggcacctacgacggcaccatctataacgcccgtcaagtgatcgacaaaatcggc
catctctgcgattacatcctgttcgactccgcctgggtcggctacgagcagtttattccg
atgatggcggatagctcgccgctgttgctggagctgaatgaaaacgatccggggattttt
gttacccagtcggtgcacaagcagcaggcggggttctcccagacgtcgcagatccacaaa
aaagataatcatattcgcggtcaggcgcgtttctgtccgcacaagcggctgaataacgca
tttatgctgcacgcctccaccagtccgttctatccgctgttcgccgcgctggacgtcaac
gcaaaaatccatgaaggagagagcgggcgtcgtctgtgggcggagtgcgtggagcttggc
attgaggcgcgtaaggctatactcgctggctgtaagctgatccagccatttattccgcca
gaggttgaaggaaaagcctggcaggattatccgacggcgaccatcgcccgcgagcgccgt
ttcttcagctttgaacccggcgcgaaatggcacggctttgccggatatgccgacgatcaa
tattttgtcgacccgtgcaaactgctgctcaccacgccgggtattgacgctgaaaccggg
cgctataccgacttcggcataccggcgacgattctggcgcactacctgcgggaaaacggc
atagtgccggagaagtgcgacctcaactcaatcctgttcctgctgacgcctgccgaaagc
gcggagaaaatggcgcatctggtggcgatgctggcgcagtttgagcggcatatcgaagac
gatacgccgcttgcagaggtgcttccgtccatcttcaataaatatccgcagcgctaccgt
gattatacgctgcgcgcgctgtgtcaggagatgcacgatctgtacgtcagctttgcggtc
aaggatctgcaaaaggcgatgttccgtcaggagagtctgccgcaggtggcgatgaaccca
caggatgccaacagcgcgtttatccgcggcgaggtcgagctggtgcgtatcagcgaggcc
gaagggcgcatagccgctgagggcgcgctgccgtatccgccaggcgtgctgtgcgtggtg
ccgggcgaggtatggggcggcgcggtgcagcgctacttccttgcgctggaagagggggta
aatatgctgccgggcttctcgccggaattacagggggtatacagtgagaaggatgccgat
ggcattaagcggctgtatgggtatgtgctgaaataa
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