Crossiella sp. CA-258035: N8J89_01200
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Entry
N8J89_01200 CDS
T09057
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cros
Crossiella sp. CA-258035
Brite
KEGG Orthology (KO) [BR:
cros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cros03032
]
N8J89_01200
03400 DNA repair and recombination proteins [BR:
cros03400
]
N8J89_01200
Enzymes [BR:
cros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N8J89_01200
DNA replication proteins [BR:
cros03032
]
Prokaryotic type
DNA Topoisomerases
N8J89_01200
DNA repair and recombination proteins [BR:
cros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N8J89_01200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WHT19734
LinkDB
All DBs
Position
complement(241873..242898)
Genome browser
AA seq
341 aa
AA seq
DB search
MTRLRRSDPGAAGLTRARHGRGFRYLDARGEPVDAAALTRIKELVIPPAWREVWICPHPN
GHIQAVGVDEAGRRQYLYHPAWTARRDAEKFDRVLRLAARLPKARTRIAEFIEQPGLGRE
RVLAAALRLLELGAFRVGGHSYAKENGSYGLATLRREHVALRKGRIHVCYLAKSGQQREV
SVVDDQAFSVVRGLLRREEDNPELFAYRNGDGWRNVRAEEVNEFLRELVGDGFSAKDLRT
WNATVLAATALAAEERPASKTSRKRAVAGMVREVAEEIGNTPAVCRRSYIDPHVIDAYDH
GLTIRPTVLRIRSTDLTMPETRDTIERSVLRLLRRARRDLG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaggctccggcgcagtgacccaggggcagcgggactcaccagggccaggcacggc
cgggggttccgctacctggacgcgcgcggcgaaccggtggacgccgccgccctcacccgg
atcaaggagctggtgatcccgccggcctggcgggaggtgtggatctgcccacaccccaac
ggccacatccaggccgtcggggtggacgaggccgggcggcggcagtacctctaccacccg
gcctggaccgcccgccgggacgcggagaagttcgaccgggtgctccggctggccgcccgg
ctgcccaaggcgcggacgcggatcgcggagttcatcgagcagccgggactgggccgggag
cgggtgctggcggcggcgctgcggctgctggagctgggcgcgttccgggtcggcgggcac
agctacgccaaggagaacggcagctacgggctggccaccctgcggcgcgagcacgtggcg
ctgcgcaagggccggatccacgtctgctacctggccaagagcggccagcagcgggaggtc
tcggtggtcgatgaccaggcgttctccgtggtgcgggggctgttgcggcgggaggaggac
aacccggagctcttcgcctaccgcaacggtgacggctggcggaacgtgcgcgccgaggag
gtcaacgagttcctccgcgaactggtcggggacgggttctccgccaaggacctgcgcacc
tggaatgccaccgtgctggcggccaccgcactggccgccgaggaacgtccggcgagcaag
accagtcgcaagcgggcggtggccgggatggtccgggaggtggccgaggagatcggcaac
acccccgcggtctgccgccgctcctacatcgatccgcacgtcatcgacgcctatgaccac
ggtctcaccatccggccgaccgtcctgcggatcaggagcaccgatttgaccatgccggaa
acacgcgacaccatcgaacgctcagtgctgcggctgctgcgccgggccagacgcgacctg
ggctga
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