Crossiella sp. CA-258035: N8J89_14220
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Entry
N8J89_14220 CDS
T09057
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cros
Crossiella sp. CA-258035
Pathway
cros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8J89_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cros03019
]
N8J89_14220
03400 DNA repair and recombination proteins [BR:
cros03400
]
N8J89_14220
Enzymes [BR:
cros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N8J89_14220
Messenger RNA biogenesis [BR:
cros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8J89_14220
DNA repair and recombination proteins [BR:
cros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N8J89_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WHT22172
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All DBs
Position
3093037..3094674
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AA seq
545 aa
AA seq
DB search
MTTSAEHEYEDELSRVAAEKFGWPELRPEQLRAMALLMAGHDVLAVLPTGAGKSAIYQVP
ALLLDGPTVVVSPLIALQRDQVDGIAGSAAPAAVAVNSALRAAERDQAWRSLREGEAEYL
FLAPEQLAKDDLVAELAGLGVSLFVVDEAHCVSAWGHDFRPDYLRLAPVIARLGRPRVLA
LTATAAPPVRADIAQRLGLREHREVVTSFDRPNLNLSVRRCADEAARRAAVLARAAEPVR
GRGLVYTASRRDAEQYAADLAAAGVRAAGYHAGMKAADRDQVQERFTAGELDVVVATSAF
GMGIDIPDVRFVLHAAMPESVDSYYQQIGRAGRDDEPAEVVLFHRPRDAALQRFLTSSPP
PADTLAEVARAIEDHDGPLPPGEPEELPPARRTRAINLLEEAGAVSAGADGHVEYADPGL
TPAQAVAKATATAEARQRLLRSRVRMMGGYAETTGCRRQYLLGYFGEPHEGGCRACDNCL
SGVAEPRPAQDAEFPPNSAVAHREWGHGVVVSAEGDRLTVLFDEQGYKTLSLAAVRERNL
LSAAD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctccgccgagcacgagtacgaggacgagctgagcagggtggccgcggagaag
ttcggctggccggagctgcgcccggagcagctgcgcgcgatggcgctgctgatggccggg
cacgacgtgctcgcggtgctgcccaccggcgcggggaagtccgcgatctaccaggtgccc
gcgctgctgctggacgggccgaccgtggtggtctcgccgctgatcgccctgcagcgcgac
caggtggacggcatcgccggcagtgccgcaccggcggcggtggcggtgaactccgcgctg
cgggccgccgagcgggaccaggcctggcggtcgctgcgtgagggcgaggccgagtacctg
ttcctcgcgcccgagcagctggccaaggacgacctggtggccgagctggccgggctgggg
gtgtcgctgttcgtggtggacgaggcgcactgcgtctcggcctggggccacgacttccgg
ccggactacctgcggctggccccggtcatcgcccggctcggacggcccagggtgctggcc
ctgaccgccaccgcggccccgccggtgcgcgcggacatcgcgcagcgcctcggcctgcgc
gagcaccgcgaggtggtcaccagcttcgaccggcccaacctgaacctgtccgtgcggcgc
tgcgccgacgaggccgcccgccgggccgcggtgctggccagggcggccgagccggtgcgc
ggccggggtctggtctacacggccagccgccgggacgccgagcagtacgccgccgacctg
gccgcggccggggtgcgggccgccgggtaccacgccgggatgaaggcggccgaccgcgac
caggtgcaggagcggttcaccgcgggcgagctggacgtggtggtggcgacctcggccttc
ggcatgggcatcgacatcccggacgtgcggttcgtgctgcacgcggcgatgccggagtcg
gtggactcctactaccagcagatcgggcgggccggccgggacgacgagcccgccgaggtc
gtcctgttccaccgcccgcgagacgccgcgctgcaacggttcctgaccagcagcccgccg
ccggcggacaccctggccgaggtggcgcgggcgatcgaggaccacgacggcccgctaccg
cccggcgagcccgaggaactgcccccggcccggcgcaccagggcgatcaacctgctggag
gaggcgggagcggtcagcgccggcgcggacggccacgtcgagtacgccgaccccgggctg
accccggcgcaggcggtggccaaggcgacggccacggcggaagcgcggcagcggctgctg
cggtcccgggtgcggatgatgggcggctacgccgagaccaccggctgccgccgccagtac
ctgctcggctacttcggcgaaccgcacgagggcggctgccgtgcctgcgacaactgcctg
agcggggtggccgagccgcgaccggcgcaggacgcggagttcccgcccaacagcgcggtg
gcgcaccgggagtgggggcacggcgtggtggtctccgccgagggggaccggctgaccgtg
ctgttcgacgagcagggctacaagacgctgtccctggcggccgtgcgcgagcggaacctg
ctcagcgcggcggactga
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