Crossiella sp. CA-258035: N8J89_19935 Help Entry N8J89_19935       CDS       T09057                                  Symbol dpdE Name (GenBank) protein DpdE   KO K03580   ATP-dependent helicase HepA [EC:5.6.2.-] Organism cros  Crossiella sp. CA-258035 Brite KEGG Orthology (KO) [BR:cros00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cros03021]     N8J89_19935 (dpdE) Transcription machinery [BR:cros03021]  Prokaryotic type   Bacterial type    Other transcription-related factors     RNA polymerase-associated proteins      N8J89_19935 (dpdE) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C DEAD ResIII Phage_Gp84 Motif Other DBs NCBI-ProteinID:  WHT23257 LinkDB All DBs Position 4386483..4389614 Genome browser AA seq 1043 aa AA seqDB search MSNGRTGLLKSSPSSRYVGNWVQVEGNGLGFGFCKAKLPNGAQVVYVDIPGVAEKQVVVP LEEITFPRFSLGTPVWIKGAHYGWVAAEIVAQAGFGEYWVRVSGSGTDVRLPGARLMVRW NKPLCDPVEALASGLCDSPEYYTTRRDFFEHLVRQRGASRGLTAAMSAPIKLYQHQLDTA ARVLGDPVMRYLLADEVGLGKTIEAGLVLRQLLLDDPKMVALVSVPATLVEQWQEELTER LALGTAIKQGRVLITRHEELPRRKDLGRYGLVIVDEAHKTIRPLREAPRIWELLQHTRAL LLLSATPMRGDLTTFLGLLNLIDPVAFPIDNVTALRERMEHRASSANSVRVLGLRRATPR QRRNALADLESLHGSDQVFTRMAQQCRAADESDIEVWRTLAEYVRETYRISRRMIRHRRG GESARGYPVAGRRATYLQLADPAREIVDQYLESLRERCTGSDDGEKFAKVVNVALAGPQA LAHYLRNDLAADPAAGRPAHLRALAERAAARLAMADIETRQRTALDVVDDRVRDGHKVVV VGTATAVVADFLAAASDRWGDKVRGHLVNMSQPDRNTAVEDFLESRVVQVLVGDFTLEEG RNLQRAQVLVNLDLPLDVNRLEQRIGRLDRFTERGDRAEVVVFEEPDSDWQTRQVELLRD GVGIFDDSVATLQIRLNRMRADMIDSLIERGSQALAPDLQALRTDFENEREQVDLLEELE SVTTATDFDDAGMAELTATDDDAAGLRAAFKRLTSSPRGGIWLKPVDGKPEGLVQFQADN GRSGQARTRRVPGLSEVASREVIPLLGTPRAYARDVAVSQRAPLLRVGEPLVDWLDQHLR MDERGRTRAIVRKTSAVELPELWLACDFLVEFDAAYLDAETPAVRRRLRRRGDALLPPEV IRTWTSIDGVATPRLAADVLDTPFTEGVDHVLRGPNWAHVLRALPDWAGQCRASFQFAEQ HLRAQPGLTERPAEAERRAQVEVNARLKVLLARSHRLPTAAERKGAKHDMDREETLGAAL VKGIARPAVSVVACGGVVLWPAS NT seq 3132 nt NT seq  +upstreamnt  +downstreamnt atgtcgaacgggcgcacgggtttgctgaagagttcgccatcgagcagatatgtcgggaac tgggtccaagtcgaaggtaacggtctaggcttcggcttctgcaaggcgaagcttccgaac ggtgcgcaggtcgtctacgtcgatatacctggagtggcggaaaagcaggtcgtcgtcccg cttgaggagatcacttttcccaggttctcgctcggcaccccggtgtggatcaagggtgcc cattacggttgggttgcggccgagatcgtcgcgcaagctggcttcggcgagtactgggtt cgggtcagcgggtcgggtactgacgtgcgactaccgggcgctcgcctgatggtgcgttgg aacaagccgctgtgtgacccggtcgaggcgttggcgagcggactctgcgactctcccgag tactacacgacccgcagagacttcttcgagcacttggtccgccagcgcggtgcctcccgg ggcctgaccgctgcgatgtccgcaccgatcaagctttaccagcaccagttggacaccgcg gcccgtgtgctcggcgacccggtcatgcgctatctgctcgctgacgaggtcgggttgggc aagaccatcgaggctggactcgttctacggcagttgctgctcgacgatcccaagatggtt gcactggtgtctgtgccggccacgctcgtcgagcaatggcaggaggaactgaccgagcgc ttggctcttggcactgccatcaagcagggtcgagttctgatcacccggcatgaggaactt ccccgccgaaaggacctgggccgctacggcctagtgatcgttgacgaagcgcacaagacg atccgtccactgcgggaggcaccgaggatatgggagttgttgcagcacacccgtgcattg ctgttgctgtcggctaccccgatgcggggcgacctgacgaccttcctggggctgttgaac cttatcgacccagtcgccttccccatcgacaacgtgacggcattgcgagagcggatggag caccgtgcgtcctcggccaacagtgtgcgcgtgctggggctgcggcgcgccacaccccga cagcgccgcaacgctctcgcagatctggagtcgctgcacggatcggatcaggtcttcacc cggatggcgcagcagtgccgcgctgccgatgaatcagacatcgaagtatggcggaccttg gctgagtacgtccgggagacctatcggatcagcaggcggatgatccgccatcgtcggggc ggcgagtccgcgcgcggctatccggtcgccggacggcgggcaacctacctccaactcgcc gacccagctcgagagatcgttgaccaatatttggaaagcctgcgggaacggtgtaccggt tcggacgatggcgagaagttcgcgaaggtggtgaacgtcgccctggccggcccgcaggcg ttggcacactaccttcggaatgatctggcggcggacccggcggccggccgacctgcccac ctgcgtgccctcgccgagcgggccgctgcgcgactcgccatggcggacatcgaaacaaga cagcgaacggcgctcgacgtcgtcgacgatcgcgtgcgtgacgggcacaaggtcgtggtc gtcggtactgcaacggccgtcgtcgcggactttctggcggcagcgtccgaccggtgggga gacaaggttcgcggtcatctggtcaacatgtcgcagccggaccggaacaccgcggtggag gattttctggagtcgcgggtcgtgcaggtgctcgtcggcgacttcaccctggaggagggc cggaacctgcagcgggcgcaagtgctggtgaatctggatctgcccctggacgtcaaccgg ctggagcagcggatcggtcgactcgatcggttcaccgaacgcggcgatcgggccgaggtg gtggtgttcgaggagccggacagcgactggcagacgcggcaggtcgagttgcttcgtgac ggagtcgggatctttgatgattcggtggccacactgcaaatcaggctgaaccgcatgcgg gcagacatgatcgactccttgatcgagcgcggcagccaggcgttggctcccgacctgcaa gcgctgaggacggacttcgagaacgaacgggaacaggtcgacttgctcgaggaattggag tcggtcaccaccgcgaccgacttcgacgacgccgggatggccgagttgactgcgaccgac gacgacgctgccggacttcgtgcggctttcaagcgactgacctcgtcaccacggggcggg atctggctcaagcccgtcgacgggaagccggaagggctggtgcagttccaggccgacaac ggcaggtccggacaggctcgaacccgccgagtacccggactctccgaggtcgcctcccga gaagtcattccgctcctcggcactccacgcgcctatgctcgggatgtggcggtgtcccag cgggcaccgttgttacgcgtcggcgaaccattggtggattggctcgatcaacacttgcgt atggacgaacgcggccgtacccgggcgatcgtccgcaagaccagtgcggtcgaactccct gaattgtggttggcctgtgacttcttggtggagttcgacgcggcgtacctcgacgcggag acccctgcggtccggcgacgcctgcgcaggcgaggtgacgcactgcttccaccggaggtc attcgaacctggaccagcatcgacggtgtcgccactccgcgcctggccgccgatgtgctc gacacgccgttcaccgaaggcgtcgaccacgtgctgcgtgggccgaactgggctcacgtg ctgcgtgcgttgccggactgggcaggccaatgccgggcaagtttccagttcgccgagcaa cacctgcgtgcgcaaccagggcttactgaacgcccagccgaggccgagcggcgagcccag gtggaagtcaacgcccgactcaaagtcctgctggcccgatcgcaccggttgcccacagca gctgagcgcaagggcgccaagcacgacatggatcgggaggagacattgggcgcggcgctc gtgaaaggcatcgcccgcccggcggtgtcggtagtcgcatgtggcggggtcgtgctctgg ccggcgtcatga

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