KEGG   Crossiella sp. CA-258035: N8J89_26610
Entry
N8J89_26610       CDS       T09057                                 
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
  KO
K03578  ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
Organism
cros  Crossiella sp. CA-258035
Brite
KEGG Orthology (KO) [BR:cros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cros03019]
    N8J89_26610 (hrpA)
Enzymes [BR:cros01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     N8J89_26610 (hrpA)
Messenger RNA biogenesis [BR:cros03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     N8J89_26610 (hrpA)
SSDB
Motif
Pfam: DUF3418 OB_NTP_bind Helicase_C HA2_C WHD_HA2 DEAD AAA_19 AAA_22 NACHT T2SSE nSTAND3 nSTAND_NTPase5 SLFN-g3_helicase AAA_30 AAA_16 ResIII PhoH FtsK_SpoIIIE AAA_23 NTPase_1
Other DBs
NCBI-ProteinID: WHT16694
LinkDB
Position
5923425..5927321
AA seq 1298 aa
MGTPLVSPSLTELHHRLAELMLRDQRRLRRRIEGARKLRDADKRAAVTAEIAGEVAAAEL
RLENRRNSRPKISYPAQLPVSQRKDEILAAVRDHQVVIVAGETGSGKTTQLPKICLELGR
GVQGLIGHTQPRRLAARTVAERIAEELGTSLGETVGYQVRFTDQSSTDTLVKLMTDGILL
AEIQNDRTLSRYDTLIIDEAHERSLNVDFLLGYLAQLLPRRPDLKVIITSATIDPERFSR
HFGDAPIIEVSGRTYPVEVRYRPIIDPDSETEDTDRDQVTAVSDAVDELLLEGPGDILVF
LSGEREIRDTADALEKRELRNTEVVPLYARLSAAEQHRVFQAHTGRRIVLATNVAETSLT
VPGIKYVIDPGTARISRYSHRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEED
FEARPEFTDPEILRTNLASVILQMTSLGLGDLAAFPFIDPPDARNITAGVQLLQELGALD
PEQSDPKKRLTPLGRKLSQLPVDPRLARMVLAADELGCVREVLVITAALSIQDPRERPAD
KQQDADGKHARFADPNSDFLAYLKLWEYLREQQQELSSNRFRKLCKAEYLNYLRVREWQD
IHSQLRQVVKQLGITPNSNPAPEQQIHTALLSGLLSHIGLQEERKKEYLGARSARFAIFP
GSALFKKPPRWVMAAELVETSRLWGRIAARIEPEWVEPLAGHLVKRTHSEPHWEKKQGAV
MAIERVTLYGIPLVVNRKVNYGRIDPELSRELFIRHALVEGDWETTHKFFHANRALLGEV
EALEDRARRRDILVDDETLFAFYDERIGKEVVSGRHFDSWWKKTRRETPDLLTFDKQALI
NATAGSITEADYPDDWRQGGVTLPLTYRFEPGRRDDGVTAHIPVGVLNQVGGDGFAWHIP
GLRKEIVVSLLKSLPKNLRRNFVPVPDVAEALLSRLSVEDGNVLDAVEDVLHELTRIEVP
REAWQLDQVPDHLKTTYRVVDENEKVLAEGKDLAALKRKLTAQVRKTLSKAGNELERTGL
RDWTIGTLPKTFSQEQNGFTVTAYPALIDETDSVAVRMLDSAAEQRRAMWRGTRRLLLLT
VPSPVKQLQRGLSNQAKLTLSRNPHGGVADLLVDCINAAADKLIAAGGGPAWDSAGFAKL
RDGVRGGLQLAVFEVVGHVEATLMAWHEVSAVLETKAGSDAAADVRKQVDALVYKGFVTA
TGWSRVVHLPRYLRAAKHRLEKVGENPRRDAELQAQVSQVQQAYLELRREVPQAAAGLAK
IRWMIEELRVSYFAQSLGTAYPVSDKRIYRTMDELLSA
NT seq 3897 nt   +upstreamnt  +downstreamnt
atgggtacgccgcttgtgagcccctcgctcaccgaactccaccaccgcctcgccgagctg
atgctgcgtgatcagcgtcggttgcgccgtcgtatcgagggggcccgcaagctgcgggac
gccgacaagcgcgccgcggtcaccgcggagatcgccggcgaggtggccgcggcggagctc
cggctggagaaccggcgcaactcccggcccaagatcagctatccggcgcagctgccggtc
agccagcgcaaggacgagatcctggccgcggtccgcgaccaccaggtggtgatcgtcgcg
ggcgagaccggctccggcaagaccacccagctgcccaagatctgcctggagctgggccgg
ggcgtgcaggggctgatcgggcacacccaaccccgacggctggccgcgcgcacggtggcc
gagcggatcgccgaggagctgggcacctcgctcggcgagaccgtcggctaccaggtccgc
ttcaccgaccagtccagcacggacaccctggtcaagctgatgaccgacggcatcctgctg
gccgagatccagaacgaccggacgctgtcccgctacgacacgctgatcatcgacgaggcg
cacgagcgcagcctcaacgtggacttcctgctcggctacctggcccagctgctgccccgc
cgccccgacctcaaggtgatcatcacctccgcgaccatcgaccccgagcggttctcccgg
cacttcggcgacgccccgatcatcgaggtctccggccgcacctacccggtggaggtccgc
taccggccgatcatcgacccggacagcgagaccgaggacaccgaccgggaccaggtcacc
gcggtctccgacgcggtggacgagctgctgctggaggggccgggcgacatcctggtcttc
ctcagcggtgagcgggagatcagggacaccgcggacgcgctggagaaacgggagctgcgc
aacaccgaggtggtgccgctgtacgcgcggctgtccgcggccgagcagcaccgggtgttc
caggcgcacaccgggcggcggatcgtgctggccaccaacgtggccgagacctcgctgacc
gtgcccggcatcaagtacgtgatcgaccccggcaccgcgcggatctcccggtactcccac
cgcaccaaggtgcagcggctgccgatcgaaccggtctcccaggcctcggccaaccagcgc
aagggccgctgcggccgggtgtcggagggcatctgcatccggctctacagcgaggaggac
ttcgaggccaggccggagttcaccgatccggagatcctgcgcaccaacctggcctcggtc
atcctgcagatgacctcgctcggcctcggcgacctggccgcgttcccgttcatcgacccg
ccggatgcccgcaacatcaccgccggtgtgcagctgttgcaggagctgggcgcgctcgac
ccggagcagagcgatccgaagaaacggctgaccccgttggggcgcaagctctcccagctg
ccggtggaccccaggctggccaggatggtgctggccgccgacgagctgggctgcgtgcgc
gaggtgctggtgatcaccgccgcactgtccattcaggacccccgcgagcgcccggcggac
aagcagcaggacgcggacggcaagcacgcccgcttcgccgatccgaactcggacttcctg
gcctacctgaagctgtgggagtacctgcgggagcagcagcaggagctctccagcaaccgg
ttccgcaagctgtgcaaggcggagtacctgaactacctgcgggtgcgggagtggcaggac
atccacagccagctgcgccaggtggtcaagcagctgggcatcaccccgaacagcaacccc
gcgccggagcagcagatccacaccgcgctgctgtcgggtctgttgtcgcacatcggtttg
caggaggagcggaagaaggagtacctgggcgcgcgcagtgcccgcttcgccatcttcccc
ggctccgcgctgttcaagaagccaccgcgctgggtgatggcggccgagctggtggagacc
tcgcggctgtggggccggatcgcggcccggatcgagccggagtgggtcgagccgctggcc
ggccacctggtcaagcgcacgcacagcgagccgcactgggagaagaagcagggcgcggtg
atggccatcgagcgggtgaccctgtacgggatcccgctggtggtcaaccgcaaggtcaac
tacggccggatcgacccggagctgagccgggagctgttcatccggcacgcgctggtcgag
ggcgactgggagaccacgcacaagttcttccacgccaaccgggcgctgctcggcgaggtc
gaggcgctggaggaccgggcgcggcggcgggacatcctggtcgacgacgagacgctgttc
gccttctacgacgagcggatcggcaaggaggtcgtctccgggcggcacttcgacagctgg
tggaagaagacccgcagggagacccccgatctgctgaccttcgacaaacaggcgctgatc
aacgccaccgccgggtcgatcaccgaggccgactaccccgatgactggcggcagggcggg
gtgacactgccgctgacctaccggttcgagccgggcaggcgggacgacggggtcaccgcg
cacatcccggtcggcgtgctcaaccaggtcggcggcgacggcttcgcctggcacattccc
gggctgcgcaaggagatcgtggtctcactgctgaagtcgctgccgaagaacctgcgccgc
aacttcgtgccggtgcccgatgtggccgaggcgctgctgagccggctctcggtcgaggac
ggcaacgtgctggacgcggtggaggacgtgctgcacgagctcacccggatcgaggtgccc
agggaggcctggcagctggaccaggtgccggaccacctgaagaccacttaccgggtggtc
gatgagaacgagaaggtgctggccgagggcaaggacctggcggcgctgaagcggaagctg
acggctcaggtgcgcaagacgttgtccaaggctggcaacgagctggagcggaccgggctg
cgggactggaccatcgggacactgccgaagactttttcgcaggagcagaacgggttcacg
gtcacggcttatccggcgttgatcgatgagaccgacagtgtggcggtccggatgctggac
agcgcggccgagcagcggcgggcgatgtggcggggaacgcggcggttgttgctgctgacg
gtgccctcgccggtgaagcagttgcagcgggggctgagcaaccaggcgaagctgacgttg
agccggaatccgcatggcggggtggctgatctgcttgtcgactgcatcaatgcggcggcg
gacaagctgatcgcggctgggggtgggcctgcttgggattcggctgggttcgcgaagctc
cgggatggggttcggggcgggttgcagctggcggtttttgaggtggtcgggcacgtcgag
gcgacgctgatggcgtggcacgaggtgtcggctgttttggagaccaaggctggttctgat
gcggccgcggatgtgcggaagcaggtggatgcgttggtgtacaaggggtttgtgactgct
accgggtggtctcgggtggtgcatctgccgcggtatctgcgggcggccaagcatcggctg
gagaaggttggggagaatcctcggcgggatgcggagttgcaggctcaggtgtcgcaggtg
cagcaggcgtatctggagcttcggcgcgaggtgccgcaggctgcggctgggttggccaag
attcggtggatgattgaggagctgcgggttagttatttcgcgcagtctctggggactgct
tatccggtttcggacaagcggatttatcggactatggatgagttgctgtctgcttag

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