KEGG   Carex rostrata (bottle sedge): 144544601
Entry
144544601         CDS       T11623                                 
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting 45
  KO
K12479  vacuolar protein sorting-associated protein 45
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:crot00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    144544601 (VPS45)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crot04131]
    144544601 (VPS45)
Membrane trafficking [BR:crot04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    144544601 (VPS45)
SSDB
Motif
Pfam: Sec1 BAR1_C Ig_SIBA-E_2nd
Other DBs
NCBI-GeneID: 144544601
NCBI-ProteinID: XP_078149266
LinkDB
Position
26:6152733..6157688
AA seq 563 aa
MALVSVVRDYIDRMLQDISGMKVLILDPLTVSIVSVVYSQSDLLKKEVFLVETVDNMSQE
SMSHLKAVYFLRPSSDIIQKLRRQLAAPRFAEYHLFFSNILKIPQIQVLADSDEQEVVQQ
VQEFYADFCAIDPYHFTLNINANHVYMLPTVADPHSTQIFCDRAVDGIAAVFLALKKRPV
IRYQRTSDIAKRIAQETAKLMYEQESGLFDFRRTENSPLLLVIDRRDDPVTPLLNQWTYQ
AMVHELIGVEDNKVDLRNIGKVPKDQQEVVLSAVQDDFFKANMYENFGDLGMNIKRMVDD
FQQIAKSNQNIQTIEDMAKFVNNYPEYRKMQGNVSKHVTLVTEMSRIVDERKLMLVSQTE
QDLACNSGQAAALEEVTNLLNNESVSDIDRFRLVLLYALRYEKDSPVHLMQLCNKLSRTA
KYKPGLVQFLLKQAGVDKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLLQTMEG
IMKGRLRDVDYPLVGNHFQQGRPQDVVIFIVGGTTYEESRAVALHNATNTGTRFFLGGSV
VLNSKRFLKDLEEAQRISKLSSV
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggcgcttgtgtcagtcgtgagggattacattgatcgaatgctacaggacatctctggc
atgaaagttcttatcctagatccgctcacggtcagtatagtaagtgtggtatacagccaa
tcagatctattgaagaaagaggtcttcttggtggagacagttgataacatgtcgcaagaa
tctatgtctcacctcaaagccgtctatttccttagaccctcgtcagacattattcagaaa
ttaaggcgccagcttgcagcccctcgatttgcggaataccatttgtttttctcaaacata
ttgaagatccctcaaattcaagtgcttgctgattctgacgaacaagaggtggtgcaacaa
gttcaggagttctatgctgatttttgcgcaattgacccataccacttcacactgaacata
aatgctaaccatgtatacatgctgcctacggtggcggacccacacagtactcagatcttc
tgtgacagagcagttgatggaatagctgcagttttcttggccctaaaaaaacgacctgta
attcgataccagcgcacatctgacatcgcgaaacgtattgcacaagaaactgcaaagttg
atgtatgagcaggagagtggtttatttgattttaggagaacagagaattctcctctattg
ctggtaattgacaggagagatgaccctgtcacacctttgttaaatcaatggacttatcag
gcaatggttcatgagttaataggagttgaagataacaaagttgatcttagaaacattggc
aaagttccaaaagatcagcaggaggtggttctatctgcagtgcaagatgatttttttaag
gcgaatatgtatgagaactttggagatctggggatgaatattaagagaatggtcgatgac
ttccaacagatagcaaagagcaaccaaaatatccagactatagaggatatggcgaagttt
gtgaacaattatccagagtatagaaagatgcaaggaaatgtatcgaagcatgtaacgttg
gtgacagagatgagtagaatagttgatgaaaggaagcttatgttggtatctcaaaccgag
caggaccttgcttgtaatagtggccaagctgctgctcttgaggaggtcacaaatctacta
aacaatgagagcgtgtcagatattgaccgattccggttggtgttgctttatgcgttgcgc
tatgagaaagatagcccagttcatttaatgcaactttgcaataagctgtctcgcactgcc
aagtacaaacctgggcttgtgcaatttctactaaagcaagctggtgtggataaaagaact
ggagatttgtatggaaatcgtgatttcctaaatattgctcgcaatatggctcgaggactc
aagggagtggagaacgtttacacacaacatcagcctcttcttttgcaaaccatggaaggc
ataatgaagggtagactcagggacgttgactatcctttggttgggaatcattttcaacag
ggaaggccacaggatgtcgtaatatttatagttggaggcacaacttatgaggaatcacgg
gctgtcgctcttcacaatgcgacgaatactgggacccgcttctttcttggtggctctgtt
gttctcaactccaaaaggtttttaaaagatttggaggaggcacaaaggatatcgaaattg
agcagtgtataa

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