Carex rostrata (bottle sedge): 144544601
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Entry
144544601 CDS
T11623
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
144544601 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crot04131
]
144544601 (VPS45)
Membrane trafficking [BR:
crot04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
144544601 (VPS45)
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GFIT
Motif
Pfam:
Sec1
BAR1_C
Ig_SIBA-E_2nd
Motif
Other DBs
NCBI-GeneID:
144544601
NCBI-ProteinID:
XP_078149266
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Position
26:6152733..6157688
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AA seq
563 aa
AA seq
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MALVSVVRDYIDRMLQDISGMKVLILDPLTVSIVSVVYSQSDLLKKEVFLVETVDNMSQE
SMSHLKAVYFLRPSSDIIQKLRRQLAAPRFAEYHLFFSNILKIPQIQVLADSDEQEVVQQ
VQEFYADFCAIDPYHFTLNINANHVYMLPTVADPHSTQIFCDRAVDGIAAVFLALKKRPV
IRYQRTSDIAKRIAQETAKLMYEQESGLFDFRRTENSPLLLVIDRRDDPVTPLLNQWTYQ
AMVHELIGVEDNKVDLRNIGKVPKDQQEVVLSAVQDDFFKANMYENFGDLGMNIKRMVDD
FQQIAKSNQNIQTIEDMAKFVNNYPEYRKMQGNVSKHVTLVTEMSRIVDERKLMLVSQTE
QDLACNSGQAAALEEVTNLLNNESVSDIDRFRLVLLYALRYEKDSPVHLMQLCNKLSRTA
KYKPGLVQFLLKQAGVDKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLLQTMEG
IMKGRLRDVDYPLVGNHFQQGRPQDVVIFIVGGTTYEESRAVALHNATNTGTRFFLGGSV
VLNSKRFLKDLEEAQRISKLSSV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgtgtcagtcgtgagggattacattgatcgaatgctacaggacatctctggc
atgaaagttcttatcctagatccgctcacggtcagtatagtaagtgtggtatacagccaa
tcagatctattgaagaaagaggtcttcttggtggagacagttgataacatgtcgcaagaa
tctatgtctcacctcaaagccgtctatttccttagaccctcgtcagacattattcagaaa
ttaaggcgccagcttgcagcccctcgatttgcggaataccatttgtttttctcaaacata
ttgaagatccctcaaattcaagtgcttgctgattctgacgaacaagaggtggtgcaacaa
gttcaggagttctatgctgatttttgcgcaattgacccataccacttcacactgaacata
aatgctaaccatgtatacatgctgcctacggtggcggacccacacagtactcagatcttc
tgtgacagagcagttgatggaatagctgcagttttcttggccctaaaaaaacgacctgta
attcgataccagcgcacatctgacatcgcgaaacgtattgcacaagaaactgcaaagttg
atgtatgagcaggagagtggtttatttgattttaggagaacagagaattctcctctattg
ctggtaattgacaggagagatgaccctgtcacacctttgttaaatcaatggacttatcag
gcaatggttcatgagttaataggagttgaagataacaaagttgatcttagaaacattggc
aaagttccaaaagatcagcaggaggtggttctatctgcagtgcaagatgatttttttaag
gcgaatatgtatgagaactttggagatctggggatgaatattaagagaatggtcgatgac
ttccaacagatagcaaagagcaaccaaaatatccagactatagaggatatggcgaagttt
gtgaacaattatccagagtatagaaagatgcaaggaaatgtatcgaagcatgtaacgttg
gtgacagagatgagtagaatagttgatgaaaggaagcttatgttggtatctcaaaccgag
caggaccttgcttgtaatagtggccaagctgctgctcttgaggaggtcacaaatctacta
aacaatgagagcgtgtcagatattgaccgattccggttggtgttgctttatgcgttgcgc
tatgagaaagatagcccagttcatttaatgcaactttgcaataagctgtctcgcactgcc
aagtacaaacctgggcttgtgcaatttctactaaagcaagctggtgtggataaaagaact
ggagatttgtatggaaatcgtgatttcctaaatattgctcgcaatatggctcgaggactc
aagggagtggagaacgtttacacacaacatcagcctcttcttttgcaaaccatggaaggc
ataatgaagggtagactcagggacgttgactatcctttggttgggaatcattttcaacag
ggaaggccacaggatgtcgtaatatttatagttggaggcacaacttatgaggaatcacgg
gctgtcgctcttcacaatgcgacgaatactgggacccgcttctttcttggtggctctgtt
gttctcaactccaaaaggtttttaaaagatttggaggaggcacaaaggatatcgaaattg
agcagtgtataa
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