KEGG   Carex rostrata (bottle sedge): 144546424
Entry
144546424         CDS       T11623                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot00860  Porphyrin metabolism
crot00970  Aminoacyl-tRNA biosynthesis
crot01100  Metabolic pathways
crot01110  Biosynthesis of secondary metabolites
crot01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:crot00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    144546424
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    144546424
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:crot01007]
    144546424
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crot03016]
    144546424
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:crot02048]
    144546424
Enzymes [BR:crot01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     144546424
Amino acid related enzymes [BR:crot01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   144546424
Transfer RNA biogenesis [BR:crot03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    144546424
 Prokaryotic type
   Other AARSs
    144546424
Prokaryotic defense system [BR:crot02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    144546424
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 Arc1p_N_like GST_C GST_C_3 GST_C_2 GST_C_6 tRNA-synt_1e DUF6461 YozD
Other DBs
NCBI-GeneID: 144546424
NCBI-ProteinID: XP_078151090
LinkDB
Position
2:complement(17325735..17329422)
AA seq 727 aa
MEAVKLVFSSDTPPLSVLAAAKVAGVNISVDAGAVPSGSPPELRLSSGVSLHGVNTLLRY
IGRVSSLPNLYGTDAVQSGQIDQWLDYAPIFSIGSEFENACAYVNNYLSHRTFLVGFNFT
IADVVIWTALAGIGQRWESLRKLNKYENLVRWFNSIAAEHSILNETVAAFVGKRGIGKSP
APSLKSKEHPPKPLTDTINYNSNSSFEVDLPGAEVGKVCVRFAPEPSGYLHIGHSKAALL
NKYFAERYNGRLIVRFDDTNPSKESEEFVDNLLKDIETLGVKYDRVTYTSDYFDALMAMV
EKMIKQGKAYVDDTPREQMQKERMDGIESACRNNTVEQNFAMWNEMLRGTERGKQCCVRG
KLDMKDPNKSMCDPVYYRCNADPHHRVGSKYKVYPTYDFACPFVDATEGITHALRSSEYH
DRNAQYYRILDDMELRRVQIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQG
IVRRGLKIEALIQFILQQGASKNLNLMEWDKLWTINKKIIDPVCARHTAVIGQDRVLLTL
TNGPDKPFVRIIPRHKKYEPAGKKATTFTNKIWLDYTDAANISQGEEVTLMDWGNAIVKE
IKKDSNNKIVGLIGELHLEGSVKSTKWKLTWLPDTEELVHLSLVDFDYLIKKKKLEEGED
FLDNLNPVTRKETFALGDSNMRNLKQGEVIQLERKGYYRCDSPFLRNSKSIVLFAIPDGR
LQTSLNN
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggaggcagtgaaattggtcttctcctccgatacaccgccactatcggtccttgccgct
gcaaaggttgccggagttaatatctctgtcgatgccggggctgtcccttctggctctccg
cctgaactgcgcttgtcatctggagtgagtttgcatggagtgaatacacttctgcgttac
attgggagggtttcatctcttcccaatctgtacgggactgatgctgtccaatctggacag
attgaccaatggctcgattatgcaccaatcttctcaataggttctgaatttgagaatgca
tgtgcatatgtcaacaattacctgtcacaccgtacttttttggttgggttcaatttcact
attgctgatgttgtgatttggactgctcttgctggtatcggtcagagatgggagagcctg
aggaagttgaataagtatgaaaacctggtgcgctggtttaattccatagcagcagagcat
agtatcttaaatgaaacagtagctgcttttgtaggaaaaagaggcattggcaaatcacct
gcaccaagccttaaatcaaaagagcatcccccgaagccgttaactgatacgatcaattat
aacagcaattcatcctttgaggttgacctacctggtgcagaagttgggaaagtttgtgtg
cgatttgctcctgagccaagtggctacctccacataggccactcgaaagccgcacttcta
aacaaatactttgctgaacggtacaatggccggttgattgtgcggtttgatgacaccaac
ccttctaaagagagtgaggagtttgtcgacaatcttttgaaagatatagaaacccttgga
gtcaagtatgacagagtgacctacacatcagactacttcgacgctcttatggccatggtt
gaaaaaatgattaagcaagggaaagcttatgttgatgacacgccgagggagcagatgcag
aaggagagaatggacggtattgagtcggcttgtagaaataacacggtagaacaaaatttt
gcaatgtggaatgagatgttacgaggaactgagagaggcaagcaatgctgcgtcagggga
aagcttgacatgaaagacccaaacaagtcaatgtgtgacccagtttactacaggtgtaat
gcagacccgcatcatcgggtcgggtcaaagtacaaggtgtacccaacgtatgactttgca
tgcccatttgtggatgcgaccgagggaataactcatgcattgaggtcgagtgaataccat
gacaggaacgctcaatactacagaattctagatgatatggagctaaggagggtgcagata
tatgagtttagccggctgaacatggtgtacacgcttctcagtaaacgcaaacttctctgg
tttgtgcaaaatggtaaggttgatggctgggatgacccccgtttccctactgtacaaggt
attgtccgaaggggccttaaaattgaggcactcatccagttcattcttcagcagggtgct
tctaaaaatctaaatttgatggaatgggacaagctgtggactataaacaagaagataata
gacccagtttgtgcccgacacacagccgtgatcgggcaagaccgggtcttactgaccctg
acaaatggtcctgacaagccattcgtacgtatcataccgagacacaagaagtatgagccc
gccggcaaaaaggcaacaaccttcacgaacaaaatatggctggactatactgatgcggca
aacatttctcaaggggaggaggtaactctaatggactggggcaatgctattgtgaaggaa
ataaagaaggatagtaataataaaattgtgggtctgattggagagttgcacctggagggt
tctgtgaagagtaccaagtggaagctaacatggcttcctgatactgaggagctggtgcac
ctttcattggtcgactttgactatttaataaagaagaagaagctggaggaaggggaagat
ttcttggataacctcaacccagtgacacgcaaggagacctttgcactgggggattccaac
atgagaaacctcaagcaaggagaggttatccaactggagaggaagggctactaccgttgc
gactcccctttcctccgcaattccaagtccattgtactctttgcaattcctgatggaagg
ctgcaaacttctcttaataactaa

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