KEGG   Carex rostrata (bottle sedge): 144546871
Entry
144546871         CDS       T11623                                 
Name
(RefSeq) small ribosomal subunit protein RACK1-like
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
crot  Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    144546871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crot03019]
    144546871
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crot04147]
    144546871
Messenger RNA biogenesis [BR:crot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     144546871
Exosome [BR:crot04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   144546871
  Exosomal proteins of colorectal cancer cells
   144546871
  Exosomal proteins of bladder cancer cells
   144546871
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 WDR55 Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EML DSE1_N ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C CFAP251_N Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_HPS5 ASA1 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_DCAF12 TRM82_WD Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_WDR19_1st Cytochrom_D1 Beta-prop_WDR75_2nd Beta-prop_IFT140_2nd WD40_RFWD3 TP_0598_N Beta-prop_Nup120_160 Tricorn_2nd
Other DBs
NCBI-GeneID: 144546871
NCBI-ProteinID: XP_078151583
LinkDB
Position
30:complement(1237894..1240158)
AA seq 346 aa
MAETLILRGTLCRHSNTVTAITMLTNGKRRIVSSSRDKSVIVWKLNPLALSANGLVEEED
SYSMALGKPFRRLTGHGYFVQDVVLSSDSRFALSCARDGMMLWDLSTGALKRIFVGHLKE
VLSVAISFDDRYIVSASRDCTIKLWNTLGECQYTIMHADAHNDCVSCVRFSPSAIGREAV
FVSGSWDCTVKVWNLSNCKLRYNLTGHRGYVNSVAVSPDGSVCASGGKDGVTILWDLAEG
KRLYSLDAGAIIHSLCFSPNRSWLCAATENSVKIWDLESKSIVQDLKPDQPPSKNQMYCA
SLNWSVDGNTLFTGYSDGTIRVWGVTNGATTTTNRDLVSLSSVLKS
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggcggaaacccttatcttgcggggcacgctatgccgccactccaacacggtgacggcg
atcaccatgctgactaacggaaaaaggaggatcgtctcctcgtcgcgtgacaagtccgtg
attgtgtggaaactcaaccctcttgccttgtcagccaatggattggtcgaagaggaagac
agctactcgatggcgctcggaaagcctttccgtcgcctcaccggccacggatattttgtc
caggacgtcgtgctttcatcagactcgaggtttgcattgtcatgtgccagggatgggatg
atgctttgggacctgtcgactggggccctcaaacggatttttgtgggccacctcaaggag
gtgctttcagtagcaatatcctttgatgatcgttatattgtctcagcctctagagactgc
acaattaagctctggaacacccttggcgagtgccagtacaccatcatgcatgcggatgct
cacaacgattgcgtgagctgtgtgcgcttctcccccagtgccattggacgagaggcagtg
tttgtctctggttcgtgggattgcactgtcaaggtgtggaatttgtccaactgcaagctt
cgctacaacctgacaggccacagaggttacgtcaattctgttgctgtcagtcctgatggt
tcggtctgtgccagcggtggcaaggacggtgtcactattctgtgggaccttgcagagggc
aagcgtctctactcccttgatgccggtgccattattcattctctttgtttcagccccaac
aggtcctggctgtgtgcagcgaccgagaatagtgtcaagatttgggaccttgagagcaag
tccattgtgcaggacctcaagcctgaccagcctcctagcaagaaccagatgtattgtgca
agtttgaactggagtgtagatggaaacacccttttcactggctactcagatggcactatt
agggtttggggtgtgacaaatggtgcaactacgacaaccaatagggacttagtgtctttg
tcaagtgttctgaaatcttaa

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