KEGG   Carex rostrata (bottle sedge): 144546971
Entry
144546971         CDS       T11623                                 
Name
(RefSeq) small ribosomal subunit protein RACK1z-like
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot03010  Ribosome
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    144546971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crot03019]
    144546971
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crot04147]
    144546971
Messenger RNA biogenesis [BR:crot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     144546971
Exosome [BR:crot04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   144546971
  Exosomal proteins of colorectal cancer cells
   144546971
  Exosomal proteins of bladder cancer cells
   144546971
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SPT8 ANAPC4_WD40 ASA1 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_EIPR1 TRM82_WD Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_DCAF12 CFAP251_N Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 PAC11 Beta-prop_Vps41 PROPPIN Beta-prop_DCAF4 eIF2A Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 WD40_RFWD3 Tricorn_2nd Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 144546971
NCBI-ProteinID: XP_078151693
LinkDB
Position
30:4251425..4253860
AA seq 333 aa
MAETLILRGTLRGHSDQVTAIAVPIDGQARIVSSSRDKSVLVWNLDPLALSANGLVGEGE
SDSTALGKPFRRLTGHGHFVQDVVLSSDSMFALSCSWDGELRLWDLSTGATTRRFVGHNK
DVLSVAFSFDNRQIVSASRDRTIKLWNTLGECKYTIQEADAHTDWVSCVRFSPSAIAPVI
VSGSWDRTVKVWNLANCKLRYTLTGHNGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK
RLYSLDAGAIIHSLCFSPNRYWLCAATENSVKIWDLESKSIVQDLKPDQPPSKNQMLYCT
SLNWSVDGNTLFTGYSDGTIRVWGVTGGNYYNQ
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcggaaacccttatcttgcggggcacgctacgtggccactccgaccaggtgacggcg
atcgccgtgccgattgacggacaagcgaggatcgtctcctcgtcgcgtgacaagtccgtg
cttgtttggaatctcgaccctcttgccttgtcagctaatggattggtcggagagggagag
agcgactcgacggctctcggaaagcctttccgccgcctcaccggccacggccattttgtc
caggatgttgtgctatcatcagactctatgtttgcattgtcatgctcctgggatggtgag
ttgaggctctgggatttgtcaactggggctaccacacggaggtttgtgggccacaacaag
gatgtgctttcagtagcattctcctttgataaccgtcaaattgtctcagcctctagagac
cgcaccattaagctctggaacaccctcggcgagtgcaagtacaccatccaggaagctgat
gcccacaccgattgggtgagctgtgtgcgtttctcccccagtgccatcgcacctgtgatt
gtgtctggttcatgggaccgcactgtcaaggtgtggaatttggccaactgcaagcttcgc
tacaccctgaccggccacaatggctacgtcaatgctgttgctgtcagtcccgatggttca
ctctgtgccagtggtggcaaagatggtgtcactcttctgtgggaccttgctgagggcaag
cgcctctactcccttgatgccggtgccattattcactctctttgtttcagccccaacagg
tactggctgtgtgccgccacagagaacagtgtgaagatttgggaccttgagagcaagtcc
attgtgcaggacctcaagcctgaccaacctcctagcaagaaccagatgttgtactgcact
agtttgaactggagtgtagatggaaacaccctattcactggctactcagatggcaccatc
agggtttggggtgtgactggtggcaactactacaaccaatag

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