Carex rostrata (bottle sedge): 144547103
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Entry
144547103 CDS
T11623
Name
(RefSeq) small ribosomal subunit protein RACK1-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
144547103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crot03019
]
144547103
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crot04147
]
144547103
Messenger RNA biogenesis [BR:
crot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144547103
Exosome [BR:
crot04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
144547103
Exosomal proteins of colorectal cancer cells
144547103
Exosomal proteins of bladder cancer cells
144547103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR55
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_SPT8
ASA1
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_EIPR1
TRM82_WD
Beta-prop_NOL10_N
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
144547103
NCBI-ProteinID:
XP_078151837
LinkDB
All DBs
Position
30:3848407..3850619
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AA seq
347 aa
AA seq
DB search
MAETLILRGTLRRHSNTVTAIAMLTNGQRRIVSSSRDKSVIVWKLNPLALSANGLVEEGD
SDSMALGKPFRRLTGNGYFVQDVVLSSDSRFALSCARDGAMRLWDLSTGTLKRIFVGHLE
EVLSVAISFDDRYIVSASRDCTIKLWNTLGECQYTIMHADAHNDCVSCVRFSPSAIGREA
VFVSGSWDCTVKVWNLSNCKLRYNLTGHRGYVNSVAVSPDGSVCASGGKDGVTILWDLAE
GKRLYSLDAGAIIHSLCFSPNRYWLCAATENSVKIWDLESKSIVQDLKPDQPPSKNQMYC
ASLNWSVDGNTLFTGYSDGTIRVWGVTGGATTTTNRDSVSLSSVLKS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacccttatcttgcggggcacgctacgccgccactccaacactgtgacggcg
atcgccatgctgactaacggacaaaggaggatcgtctcctcgtcgcgtgacaagtctgtg
attgtgtggaaactcaaccctcttgccttgtcagccaatggattggtcgaagagggagac
agcgactcgatggcgctcggaaagcctttccgtcgcctcactggcaacggatattttgtc
caggacgtcgtgctttcatcagactcgaggtttgcattgtcatgtgccagggatggtgcg
atgaggctgtgggacctgtcgactgggaccctcaaacggatttttgtgggccacctcgag
gaggtgctttcagtagcaatatcctttgacgatcgttatattgtctcagcctccagagac
tgcacaattaagctctggaacacccttggcgagtgccagtacaccatcatgcatgcggat
gctcacaacgattgtgtgagctgtgtgcgcttctcccccagtgccatcggacgagaggca
gtgtttgtctctggttcgtgggattgcactgtcaaggtgtggaatttgtccaactgcaag
cttcgctacaacctgacaggccacagaggttacgtcaattctgttgctgtcagtcctgat
ggttcggtctgtgccagcggtggcaaggatggtgtcactattctgtgggaccttgcagag
ggcaagcgtctctactcccttgatgccggtgccattattcattctctttgtttcagcccc
aacaggtactggctgtgtgcagcgaccgagaatagtgtcaagatttgggaccttgagagc
aagtccattgtgcaggacctcaagcccgaccagcctcctagcaagaaccagatgtattgt
gcaagtttgaactggagtgtagatggaaacacccttttcactggctactcagatggcact
attagggtttggggtgtgacaggtggtgcaactacgacaactaatagggactcagtgtct
ttgtcaagtgttctgaaatcttaa
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