KEGG   Carex rostrata (bottle sedge): 144547361
Entry
144547361         CDS       T11623                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot04142  Lysosome biogenesis
crot04144  Endocytosis
crot04145  Phagosome
crot04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:crot00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    144547361
   04145 Phagosome
    144547361
   04142 Lysosome biogenesis
    144547361
   04148 Efferocytosis
    144547361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crot04131]
    144547361
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crot04147]
    144547361
   04031 GTP-binding proteins [BR:crot04031]
    144547361
Membrane trafficking [BR:crot04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    144547361
Exosome [BR:crot04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   144547361
  Exosomal proteins of other body fluids (saliva and urine)
   144547361
  Exosomal proteins of colorectal cancer cells
   144547361
  Exosomal proteins of bladder cancer cells
   144547361
GTP-binding proteins [BR:crot04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    144547361
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 AAA_5 nSTAND3 AAA_22 Septin AAA_7 NTPase_1 cobW DAP3 PduV-EutP NACHT Sigma54_activat MutS5_N NB-ARC AAA_24 ATPase_2 nSTAND1 MCM
Other DBs
NCBI-GeneID: 144547361
NCBI-ProteinID: XP_078152113
LinkDB
Position
31:complement(5111916..5116700)
AA seq 208 aa
MATARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFMTKEILVEDRLVTL
QVWDTAGQERFQSLGVAFYRGADCCVLVYDVNVKKSFDTLDNWREEFLNQASPSDPKNFP
FILLGNKIDIDGGNSRSVSEKSAQDWCAANGNIPYFETSAKEDYNVDAAFLSVAKLALDH
ERNQDIYFQTLPEATSTEPTEQRGGCAC
NT seq 627 nt   +upstreamnt  +downstreamnt
atggcaactgcgaggcgccgaaccttgctcaaggtcatagtacttggcgatagtggagtc
gggaagacatcgttgatgaaccaatatgtgcataagaaatttagtcaacagtacaaggcc
accataggtgctgatttcatgactaaggagatcctggtcgaagacagacttgttacactc
caagtatgggatacggctgggcaagagaggtttcaaagcctaggtgtggccttctataga
ggggctgactgttgtgtcttagtttatgatgtcaatgtcaagaagtcttttgacacactt
gacaactggcgtgaagaatttcttaaccaggctagcccatcagatcctaaaaatttcccc
ttcattttactcggtaataagattgatatagatggtggcaacagcagatctgtatctgag
aagagtgcgcaagattggtgtgctgctaatggaaatattccttattttgaaacttcggcg
aaggaggactacaatgtcgatgctgcttttctctctgttgccaaactcgcactagaccat
gagcgcaaccaggacatatacttccagacccttccagaagctacctcaacagagcctact
gaacaaagaggaggatgcgcctgttag

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