Carex rostrata (bottle sedge): 144548631
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Entry
144548631 CDS
T11623
Name
(RefSeq) small ribosomal subunit protein RACK1z-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
144548631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crot03019
]
144548631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crot04147
]
144548631
Messenger RNA biogenesis [BR:
crot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144548631
Exosome [BR:
crot04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
144548631
Exosomal proteins of colorectal cancer cells
144548631
Exosomal proteins of bladder cancer cells
144548631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_TEP1_C
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Aladin
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF4
TRM82_WD
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_DCAF12
ASA1
Beta-prop_NWD2_C
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_EIPR1
eIF2A
SHKBP1_KCTD3_C
DUF7899
Motif
Other DBs
NCBI-GeneID:
144548631
NCBI-ProteinID:
XP_078153474
LinkDB
All DBs
Position
2:complement(1548377..1550438)
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AA seq
334 aa
AA seq
DB search
MAETETLILRGMLCGHSDRVTAITVPINGQARIVSSSHDKSVIVWNLDPLALSANGLVGE
GESDSAVLGKPFRCLTGHRNFVKDVVLSSSSMVALSCSSDTDLRLWDLSTGYTAKRFIGH
HEDVLALALSFDSCQIVSASKDCSIKLWNSLGDCVNTIRNAHTKGVSCVRYSPDVIDKVF
VSGSWDGTVKVWNFQCEVRHNLTGHNGAVNAVAVSPEGSICASGGMDCVALLWNLTDGEC
IYSLDADDIIHSLCFSPTRYWLCAATRYSVKIWDIESKSIVQDLKHDQPPSKKQTLYCTS
LNWSVDGNTLFTGYSDGTIRVWGVTGVTDGNSNQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacggaaacccttatattgcggggcatgctatgcggccactccgacagggtg
acagcgatcaccgtgccgattaacggacaagcaaggatcgtctcctcgtcacatgacaag
tccgtgattgtttggaatctcgaccctcttgccctttcagccaatggattggtcggagag
ggagagagcgattcggcggtgctcggaaagcctttccgctgcctcaccggccaccgcaat
tttgtcaaggatgttgtgctttcatcaagctcgatggttgcattgtcatgctcctcggat
actgatttgaggctgtgggacctgtcaactgggtacaccgcaaagaggtttattggccac
catgaggatgtgcttgcattagcattatcctttgacagctgtcaaattgtctcagcctct
aaagactgctcaattaagctctggaacagccttggcgattgcgtaaacaccattaggaat
gctcacaccaaaggcgtgagctgtgtgcgctactcccccgatgtcatcgacaaagtgttt
gtctctggttcgtgggatggcactgtcaaggtgtggaatttccagtgcgaggttcgccac
aacctgacaggccacaatggtgccgtcaatgctgttgctgtcagtcctgaaggttcgatc
tgtgccagtggtggcatggattgtgtcgctcttctgtggaacctcacagatggcgagtgt
atctactcccttgatgccgatgacattattcattctctttgtttcagccccaccaggtac
tggctgtgtgcagcgaccaggtatagtgtcaagatttgggacattgagagcaagtccatt
gtgcaggaccttaagcatgaccagcctcctagcaagaaacagacattgtactgcacaagt
ttgaactggagtgtagatggaaatacccttttcactggctactcagatggcactattagg
gtttggggtgtgacaggtgtgactgatggcaactccaaccaatag
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