Carex rostrata (bottle sedge): 144548892
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Entry
144548892 CDS
T11623
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crot04812
]
144548892
Enzymes [BR:
crot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
144548892
Cytoskeleton proteins [BR:
crot04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
144548892
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_14
AAA_22
AAA_33
TIP49
Mg_chelatase
AAA_16
AAA_28
IstB_IS21
AAA_24
AAA_17
AAA_7
AAA_2
PhoH
T3SS_needle_E
RNA_helicase
TsaE
nSTAND3
NPHP3_N
AAA_18
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
144548892
NCBI-ProteinID:
XP_078153727
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All DBs
Position
34:1758483..1763031
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AA seq
533 aa
AA seq
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MVGALAGLQEHVKLAREYALEGLYDTSIIFFDGALAQINKHLSTLDDPATRAKWSNCKKA
ISEEIEVVKQLETELRSFKDAPGTHRSSSPPIPTRSNFVFQPLDEYPSASSAPGASPFDD
PDVWRPPSRDQQGRRSGTGRVAGGGNRRSSNDGAWARGGTGTNRVGTGGTRGGKSGGTGT
GKGATGTRSSNVGGTSAKKGKGNSSKGDSQGGDGEDGKVKRGQYEGPDGDLAAMLERDVL
DNTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAK
AVATECGTTFFNVSSATLASKWRGESERMVRVLFELARAYAPSTIFIDEIDSLCNSRGAS
GEHESSRRVKSELLVQIDGVNNSSTGDDGQKKIVMVLAATNFPWDIDEALRRRLEKRIYI
PLPNFESRKELIKINLRTVEVATDVNTEEVARRTEGYSGDDLTNVCRDASMNGMRRKIAG
KTRDEIKNMSKDEISKDPVAMCDFEEALAKVQRSVSPNDIEKHEKWFNEFGSA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagcattggcggggttgcaagagcacgttaagctcgctagagagtacgcgctc
gaggggctttacgacacctccattatcttcttcgatggagctctcgctcagatcaacaag
catttaagcacactagatgacccagcaacaagggcaaaatggtcaaattgcaaaaaggct
atctcagaagaaatagaggtggtaaagcaactcgaaactgagctcagatcattcaaggat
gctcctgggacccaccgatcatcctctcctccaattccaacccgctccaattttgtcttt
cagcccttggatgagtacccatcagcctcgagtgcaccgggcgcatctccttttgacgat
cctgacgtgtggagaccaccaagcagggatcagcaagggaggcgttctggcacagggagg
gtagcaggaggaggtaacaggaggagttcaaatgatggggcgtgggcccgaggtggtact
ggtaccaacagagtgggtactggtggtacgcgtggaggtaaatcaggtggtactggtaca
gggaaaggtgctactggtacaaggtcatcaaatgttggtggtaccagtgcaaagaaaggg
aaaggaaattctagcaaaggagattctcagggtggggatggggaggatggcaaggtgaag
agaggacagtacgagggacctgatggtgacctggcagccatgctggagagagatgtgctc
gacaacacgccaggtgtcagatgggatgacgtggcaggtcttagtgaggccaaaaggctt
ctagaagaggccgttgttctccctctttggatgcctgaatattttcagggaatacgtagg
ccgtggaaaggggtactcatgtttggtcctccaggtacaggaaaaactctactggcaaag
gcagtggccacggaatgtgggaccaccttttttaatgtttcctctgccacgctggcatcg
aaatggagaggagagagcgagcgtatggttagagttttgtttgaattggctcgagcatat
gcacccagtaccattttcattgatgagatcgattccctctgcaattcccgtggagcatcg
ggtgagcatgaatcatctagaagggtaaagtcggaacttcttgtgcaaattgacggagtg
aacaatagctctactggcgatgatggccagaagaagattgtaatggttttggccgccacc
aacttcccttgggacattgacgaagcgctcaggaggcgtctagagaagcgtatatacatc
cctctcccaaatttcgagagtagaaaggagctaatcaagattaatttacgaactgttgag
gtggcaacagatgtaaacacagaagaagtggcccgccgcacagaaggatacagtggagat
gacctcacgaatgtttgccgtgacgcatctatgaatggcatgcgtagaaaaattgccggg
aaaacaagggatgagattaagaacatgtctaaagatgaaatttcgaaagatcccgtggca
atgtgcgatttcgaagaggcacttgcaaaggtacagagaagtgtttctccaaatgatatt
gaaaaacacgagaagtggtttaatgaattcggatcggcttaa
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