KEGG   Carex rostrata (bottle sedge): 144549196
Entry
144549196         CDS       T11623                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot03083  Polycomb repressive complex
crot04120  Ubiquitin mediated proteolysis
crot04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    144549196
   04120 Ubiquitin mediated proteolysis
    144549196
  09126 Chromosome
   03083 Polycomb repressive complex
    144549196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crot04131]
    144549196
   04121 Ubiquitin system [BR:crot04121]
    144549196
   03036 Chromosome and associated proteins [BR:crot03036]
    144549196
Membrane trafficking [BR:crot04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    144549196
Ubiquitin system [BR:crot04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     144549196
   Cul7 complex
     144549196
Chromosome and associated proteins [BR:crot03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     144549196
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     144549196
SSDB
Motif
Pfam: Skp1_POZ Skp1 Ribosomal_L7Ae
Other DBs
NCBI-GeneID: 144549196
NCBI-ProteinID: XP_078154057
LinkDB
Position
34:4980557..4982121
AA seq 185 aa
MADNGGKKITLKSSDGEEFEVPEVVAMESQTIRHVIEDVCAKNSIPLLNVNSKILSKVIE
YCKKHVAAAEAAASKASTEEGTAAAASVTKPSDEDLKTWDAEFVKVDKGTLFNLILAANY
LHIPGLLDLTCQAAADMIKGKSAKEIRKFFNLKNCISPEEEEEIRRENQWAFEEEKRTRA
FDAYA
NT seq 558 nt   +upstreamnt  +downstreamnt
atggcggacaacggtggcaagaagattactctgaagagttccgatggagaggagttcgag
gtgcccgaggtggtggcgatggagtctcagacgatccgccatgtgatagaagacgtctgt
gcgaagaactctatcccgcttctgaacgtgaactccaagattctctccaaggtgatcgag
tactgtaagaagcacgtcgccgcggcggaggcagcggcgtctaaggcttcgacggaggag
ggtaccgccgccgctgcgtctgtgaccaagccaagcgatgaggatctgaagacctgggac
gcggagtttgtgaaggtggataagggcacgttatttaatctcatattggctgctaactac
ctgcacatcccggggctgttggatctgacatgtcaggctgcggcagacatgataaagggg
aagtcagcaaaggagatacggaagttttttaacctcaaaaattgcatttctcctgaggag
gaagaggagattcgccgtgaaaaccagtgggctttcgaggaagagaaacgcactagagct
tttgatgcatatgcatga

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