KEGG   Carex rostrata (bottle sedge): 144551578
Entry
144551578         CDS       T11623                                 
Name
(RefSeq) uncharacterized protein LOC144551578 isoform X1
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot03060  Protein export
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    144551578
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:crot02044]
    144551578
Secretion system [BR:crot02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   144551578
SSDB
Motif
Pfam: SRP54 SRP-alpha_N SRP54_N AAA_22 nSTAND_NTPase5 AAA_17 MMR_HSR1 AAA_16 MeaB AAA_30 AAA_19 CLP1_P ETF AAA_33 Zeta_toxin nSTAND3 SPOUT_MTase
Other DBs
NCBI-GeneID: 144551578
NCBI-ProteinID: XP_078155731
LinkDB
Position
3:12727217..12732496
AA seq 617 aa
MLEQLLIFTRGGLVLWSSCRAFGNALKGSPIDALIRSCLLEERSADSSFSHESYTLKWAF
HNELGLVFVAVYQRILHLLYVDDLLSSVRQEFSAVYDPKRTVYNDFDETFRQLQMEAEAR
VEEMKKLKQSGRAPPVQSKKGGGGQRALTGSQRNGTKKGSSGGSTKDDSDGDTGNGRLVS
NGVENGAKGSNKSPVHSKGKENDAPDTGAFDVNKLMMRSKTGKKSDVDKKSGPTKGQPKK
AVKKKRVWDDAPKEEPKLDFTDEKGDEGMEREVAVIRGESMMDKEEVISSESEGEEEDEV
EGAKPGAKKKGWFASMFKSIAGNNSLEKADLQPALKALKDRLMTKNVAEEIAEKLCESVA
NSLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVHAAKEQGRPYVVVFVGVN
GVGKSTNLAKVAYWLLQHDVSVTLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAI
VAKEAIQEAAHNKSDVVLVDTAGRMQDNEPLMRALSKLINLNNPDLVLFVGEALVGNDAV
DQLSKFNQKLADLSTVANARLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY
TDLKKLNVKSIVKTLLK
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgctggaacaactcttgatcttcacacgaggcggcctcgtgctgtggtcgtcgtgccgc
gcgtttgggaacgctctcaagggttctccaattgacgccttgatcagatcgtgcctcctg
gaggagcgttcggcggattcctctttctcccatgagtcgtacacgctcaagtgggccttc
cacaacgagcttggcctcgtatttgttgctgtgtaccaacgtattctccaccttctgtat
gtagacgatctgctttcgtcggttcgtcaggaattctctgctgtttatgatcccaagcgc
acagtttacaatgattttgacgagacttttcgtcagcttcagatggaggcagaggcacgt
gtggaggagatgaagaagttgaagcagtctggccgggccccaccagtacagtctaagaaa
ggtggtggtgggcagcgtgctcttaccggctcccaacgtaatggtaccaagaagggaagc
agtggtggttctacaaaggatgattctgatggtgatactggaaatggtaggttagtatct
aatggggtagagaatggtgcgaagggttccaacaagtctcctgtacatagtaagggcaag
gagaatgatgcacctgatacaggggcgtttgatgtaaataagctgatgatgcggtcgaag
accgggaagaagagtgatgttgacaagaagtcaggtcccactaagggacaacccaagaag
gcggtaaagaagaaaagggtttgggatgatgctccgaaagaggagccgaagttagatttc
actgacgagaaaggggatgaggggatggagcgtgaggtggcagtgattcgtggagagagc
atgatggataaagaggaggtgattagtagcgagagtgagggagaagaggaggatgaggtt
gagggtgcgaagccaggggctaagaagaagggttggtttgcttccatgtttaagagtatt
gctggcaacaactctcttgagaaagctgatcttcaaccagcactgaaagctctcaaggat
aggctaatgactaaaaatgtggctgaagaaatagctgaaaagctttgtgaatcggtggca
aacagtctggaaggaaagaagcttggatctttcaccagaatatcctccactgttcagaca
gcaatggaagaggcacttcttcgtatcctgaccccaagacggtctattgacatcttacga
gatgttcatgctgccaaggagcaaggaaggccatatgtcgttgtctttgtcggcgtaaat
ggtgttggcaaatccactaaccttgccaaggttgcgtactggcttctccagcatgatgtg
agtgtcacgcttgcggcttgcgataccttcaggtcaggtgcagttgagcagcttaggact
cacgcacgtcggcttcagatacctatattcgagaaggggtatgagaaggatccggcaatt
gttgctaaagaagctattcaagaagccgctcataataaatcagatgttgttcttgttgat
acggctggccgcatgcaggataatgaaccactgatgagggcattgtccaagctgatcaac
ctcaataatcctgatctggttttgtttgttggagaggcacttgtcggtaatgatgcagtt
gatcaactctcaaaattcaatcagaaattggctgacctttctactgttgcaaatgcaagg
ctgattgatggtatcctgctcactaaattcgacacaattgatgataaggttggtgcggcg
ctttctatggtatacgtatctggagctcctgtgatgtttgtgggttgcgggcaatcgtac
actgacctcaagaagctgaacgtcaaatctatagtcaaaactctcctcaagtga

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