Carex rostrata (bottle sedge): 144552216
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Entry
144552216 CDS
T11623
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crot03110
]
144552216
Chaperones and folding catalysts [BR:
crot03110
]
Heat shock proteins
HSP100
144552216
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_28
NACHT
AAA_18
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
DISC1_C
Motif
Other DBs
NCBI-GeneID:
144552216
NCBI-ProteinID:
XP_078156489
LinkDB
All DBs
Position
3:complement(2717442..2725479)
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AA seq
918 aa
AA seq
DB search
MAGSLVQSAVLPTLHGSRAQFRRSARTRAISRVTMSTLQVRSPSLRFSGTRVPHTSFFGT
GSILPGQAMRPVRKQTRRVAVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQLLLGL
IGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELALEEARQ
LSHNYIGSEHLLLGLLREGEGVAARVLETLGAEPSNVRTQVIRMVGESTETVGAGVGGGS
SGQKLPTLEEYGTNLTKLAEEGKLDPVVGRKEQIERVTQILGRRTKNNPCLIGEPGVGKT
AIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDII
LFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQ
PVKVPEPTVDETIEILKGLRERYEIHHKLRYTDEALKAAANLSYQYISDRFLPDKAIDLV
DEAGSRVRLRHAQLPEEARELDKELRGITKEKNEAVRGQDFEKAGELRDREMELKAKIVS
MIDKGKEESKAESETGESGPVVTEADIQHIVSSWTGIPVEKVSSDESNRLLKMEETLHTR
IIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALATYYFGSEEAM
IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM
MLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDQESDEKDSSYNRIK
SLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKKKEIDLQVTER
FRDRVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDLDGKVVVLS
GESGGAAKEAVAPPAVPV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttcattggtacagtcggcagtgttaccaactctgcatggcagccgggcgcag
tttcgccggtcggccaggacccgtgctatttccagagttacaatgagcacattacaagtc
cgctccccttctcttagattttctggaacccgagttccacatacttccttctttggtacc
ggatccatcttaccaggtcaggcaatgcgtccagtccgtaagcagaccagaagggttgct
gtcaaggccatgtttgaacggttcactgagaaggctatcaaggttataatgttggcacaa
gaagaggcgagacggttgggccacaattttgtggggacagagcagcttctgttggggttg
ataggagagggaacaggcatagccgcaaaagtgctgaagtctatgggtataaacctaaaa
gatgcacgtgtagaggtagagaagattattggcagaggcagtggatttgtggctgttgag
atccccttcactccacgtgctaagcgagttttggagctcgctttggaggaagcccgtcaa
cttagccacaactacataggatcagagcacttgctccttggtttgttgcgagagggagag
ggtgtggctgcacgcgtgcttgagacccttggtgctgagcccagcaatgttcgtactcag
gttataaggatggttggggaaagcacagagacagtgggtgctggtgtagggggtggaagc
agtgggcaaaaattaccgactctcgaggaatatggaactaacctcactaagctagctgag
gagggcaaactagaccctgtggtggggaggaaagagcagatagagcgcgtgacacaaatt
ctggggagaagaacaaaaaacaacccatgcctaattggcgagcccggtgtaggcaagact
gccattgcagaaggccttgcccagcgtatttctaatggagatgttcctgaaaccattgaa
ggaaagaaggtaataacacttgacatgggactgcttgtggcggggacaaaatacagggga
gagtttgaggagaggcttaagaagcttatggaggaaattaagcagagtgatgacatcatc
ctcttcattgatgaggttcacacgcttattggagcaggtgctgcagagggtgccattgat
gctgccaatatcttgaagcctgctcttgccagaggtgaacttcagtgcattggtgcaaca
acactagacgaatacaggaagcacatagaaaaggacccagcacttgagagaaggttccag
cctgttaaggtacctgaacctactgtcgatgaaacaatagaaatcctgaagggccttcgt
gagaggtatgagattcatcacaagctccgctacactgatgaggctttaaaagctgccgca
aacctgtcataccagtatatcagtgatcgtttcctccctgataaagcaattgacttggtt
gatgaagctggttctcgtgtcaggcttcgccatgctcagcttccggaggaggctagggaa
cttgacaaggaactccgcgggattaccaaggagaagaatgaagcagttcgaggccaagat
tttgagaaagctggagagctgagagaccgtgagatggaactaaaggctaagattgtatcc
atgattgacaagggcaaggaggagagcaaggctgagagtgaaactggcgaatctggtcca
gttgtcactgaggctgacatccaacacattgtctcatcctggactggcatcccagttgag
aaggtttcatctgacgaatcaaaccgcctcttgaaaatggaggagaccctccacacccgc
atcattggccaggacgaggctgtcaaggccatcagccgtgcaatccgccgtgccagggtt
ggcctcaagaaccccaaccggccaattgctagcttcatcttttcaggtcccactggtgtg
ggcaagtctgagcttgccaaggctcttgccacctactacttcggttctgaggaggccatg
attcgcctggacatgagtgagttcatggagcgtcacactgtatccaagcttatcgggtcc
ccacctggttatgttgggtacactgagggtggccagcttactgaggcggttcgacgtaga
ccgtacactgtggtactctttgatgagatcgagaaggcacaccctgatgtgttcaacatg
atgctccaaatccttgaagatgggaggttaaccgacagcaagggcagaaccgttgatttc
aaaaacaccctgctcatcatgacgtccaacgttggtagcagcgtgattgagaaaggcggc
cgcaaaattgggtttgaccaggagtctgacgagaaagacagcagctacaaccgcatcaag
agccttgtcactgaggaactaaaacaatacttcagacctgagttcctgaacaggctcgac
gagatgattgtgttcaggcaactaaccaagctcgaagtgaaggagattgctgatataatg
ttgaaggaggtgtttgatcggttgaagaagaaagaaatagacttgcaagtgacagagagg
tttagggatcgggtggtggatgaagggtacaacccaagctatggtgccaggccgctcaga
cgtgccataatgcggctgctcgaggacagccttgccgaaaagatgcttgctggtgaggtc
aaggaaggggactcggcgattgttgatgtagacttggatgggaaagttgtagtcttgagt
ggtgagagtggtggtgctgccaaggaggccgtcgccccgccagctgtgcccgtgtga
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