Carex rostrata (bottle sedge): 144552275
Help
Entry
144552275 CDS
T11623
Name
(RefSeq) nagB/RpiA/CoA transferase-like superfamily protein
KO
K08963
methylthioribose-1-phosphate isomerase [EC:
5.3.1.23
]
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot00270
Cysteine and methionine metabolism
crot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
144552275
Enzymes [BR:
crot01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.23 S-methyl-5-thioribose-1-phosphate isomerase
144552275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IF-2B
Motif
Other DBs
NCBI-GeneID:
144552275
NCBI-ProteinID:
XP_078156505
LinkDB
All DBs
Position
1:complement(3156618..3161580)
Genome browser
AA seq
371 aa
AA seq
DB search
MGESNETSKALQAICYQRGSLRLLDQRKLPLESVYLNIQDSKDGWNAIRDMVVRGAPAIA
IAAALSLAVEIHSLEFKGAPADAADFIVKKLEFLVSSRPTAVNLSDAAMKLGDLVRKTSE
TTTEVKTVFKVFVEAAEAMLENDVADNKAIGSHGAIFLRKKSEGLDKLCVLTHCNTGSLA
TAGYGTALGVIRALHAGGYLDKAFCTETRPFNQGSRLTAYELVHDKIPATLVTDSAVAAL
MKSGSVNAVVVGADRIAANGDTANKIGTYSHALCAKHHGVQFYVAAPLTSIDLSISSGQK
IVIEERSPKELLNSEGGLGKQVAASGIAVWNPAFDVTPASLITAIITEKGVITKSGDDVF
DIKNFVESTRG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatctaacgaaacgtcaaaagctctccaagctatttgctaccagcgcggttct
ctccgcctcctcgatcagagaaaactgccgctggagagtgtttaccttaatatccaggat
tccaaggatggatggaatgcaataagagatatggtggttagaggtgctccagcaattgca
atagcagccgctctttctttagctgttgaaattcacagtcttgaattcaaaggagctcct
gctgatgctgctgattttattgtcaagaaactagaattcttagtttcaagccggccaact
gctgtgaatctctctgatgcggcaatgaaacttggagatttagttcgaaagacttctgaa
accacaactgaggtcaagaccgtatttaaggtttttgttgaggcagctgaggcgatgctt
gaaaatgatgttgccgataacaaggcaattgggtcccatggtgccatctttcttcgaaaa
aaatctgagggcttagataaattgtgcgtcctgacgcattgcaacactggcagtctggca
acagctggctatggaactgcacttggtgtgattcgtgctcttcatgcaggaggttattta
gataaggccttttgcaccgagacccgaccatttaaccaggggtcaaggcttacggcttat
gagttggttcatgataaaatccctgccactctagttactgattctgcagttgcagcactt
atgaaatcaggaagtgtcaacgctgttgtagttggtgcagaccgaattgctgcaaatggt
gatactgctaataaaatcgggacctatagccatgcactttgtgcaaagcaccatggtgtg
caattttacgtggcagcgcctttaacttccatcgacctgtcaatatcttctggtcagaaa
attgtgatagaggagaggtcgcctaaggagttacttaattctgaaggaggtcttggaaaa
caagttgcagcaagtggaattgcagtgtggaatcctgcttttgatgttactccagctagc
ctgataactgccatcataactgaaaagggtgtcatcacaaagagtggtgatgatgttttt
gacataaagaactttgtagaaagcacaagaggctga
DBGET
integrated database retrieval system
