Carex rostrata (bottle sedge): 144554659
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Entry
144554659 CDS
T11623
Symbol
CHIP
Name
(RefSeq) carboxyl terminus of HSC70-interacting protein isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
crot
Carex rostrata (bottle sedge)
Pathway
crot04120
Ubiquitin mediated proteolysis
crot04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
144554659 (CHIP)
04120 Ubiquitin mediated proteolysis
144554659 (CHIP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crot03110
]
144554659 (CHIP)
04131 Membrane trafficking [BR:
crot04131
]
144554659 (CHIP)
04121 Ubiquitin system [BR:
crot04121
]
144554659 (CHIP)
Enzymes [BR:
crot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
144554659 (CHIP)
Chaperones and folding catalysts [BR:
crot03110
]
Other chaperones and cochaperones
Others
144554659 (CHIP)
Membrane trafficking [BR:
crot04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
144554659 (CHIP)
Ubiquitin system [BR:
crot04121
]
Ubiquitin ligases (E3)
U-box type E3
144554659 (CHIP)
Multi subunit type E3
STUB1-CHIC2 complex
144554659 (CHIP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
CFAP70_TPR_C
ANAPC3
TPR_14
TPR_BSK1_C
CFAP70_mid_TPR
TPR_12
zf-NOSIP
TPR_16
TPR_19
Motif
Other DBs
NCBI-GeneID:
144554659
NCBI-ProteinID:
XP_078159102
LinkDB
All DBs
Position
5:10570893..10574635
Genome browser
AA seq
273 aa
AA seq
DB search
MGPAVIPESVLKQAEILKQDGNTYFKKDRIGAAIDAYTEAIVLCPNVAVYWTNRALCYKR
RNEWRKVENDCSKALQLDNNSVKAHYMLGLALLDREEFAEGIKQLEKSLELGRGAHPASY
MVEEIWQELAKAKYSDWERGSIKRLDALHRLEEACENALRSYRSVDGSDAAGLLEQISEL
KEVFRKVVLPDVPSEVPDHLCCKITLDIFRDPVITPTGITYERAVLLEHLHKVGKFDPVT
RVALEPSQLVPNLAIKEAVQAFLSEHGWAYKMR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgggaccggcggtgataccggagagcgtattgaagcaggcggagatcctgaagcaagac
gggaacacctacttcaagaaagatcgtataggtgccgccattgatgcttacacggaggca
attgttctttgccctaatgtggcagtgtactggaccaacagagcattatgttacaagagg
agaaacgaatggagaaaagtcgagaatgattgtagtaaagctcttcagcttgacaataat
tctgtcaaggcacactatatgttaggtctcgcacttttggacagggaggaattcgctgaa
ggcattaaacaacttgagaagtctcttgaactggggagaggagcccacccggcaagctat
atggtagaagagatatggcaagagcttgccaaagccaagtactctgactgggaaaggggt
tccataaaacgtctagatgctctccacaggctagaggaagcgtgtgaaaatgctcttagg
agttaccgtagtgtggatggttctgatgcggcaggtttgctagagcaaatcagtgagctt
aaagaggtctttagaaaagttgttttgcctgatgttccttctgaggtaccagaccacttg
tgttgtaagattacactagacatattccgggaccctgttataacccctactggtatcact
tatgagcgggctgtacttcttgagcatctgcataaggtagggaagtttgatccagttaca
agagtagcacttgagccgtctcaactggtaccaaatctggcaatcaaagaggcagttcag
gccttccttagtgaacacggttgggcttataagatgcggtga
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