Carex rostrata (bottle sedge): 144555283
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Entry
144555283 CDS
T11623
Name
(RefSeq) haloacid dehalogenase-like hydrolase family protein isoform X1
Organism
crot Carex rostrata (bottle sedge)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Hydrolase
HAD_2
Thioredoxin_8
SGL
Redoxin
TEN_NHL
AhpC-TSA
Hydrolase_like
Thioredoxin
DUF5128
HAD
Fn1-VW_OTOGL
Motif
Other DBs
NCBI-GeneID:
144555283
NCBI-ProteinID:
XP_078159689
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Position
6:5817288..5827732
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AA seq
1091 aa
AA seq
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MARNLTTPTFRLIPRNYRKHPCSFPKFAPPPSTSPPVAGNLAVFFQRRRSYVKAQQKAEM
ATVGGEVVTQGENWGKVSAVLFDMDGVLCDSEELSRLAAVDVFADLGVAVTTEDFVPFMG
TGEAKFLGGVAKVKGLNDLTPEDLKKRFFEIYLNKYAKPDSGIGFPGALELIKECKQKGL
KVAVASSADRIKVDANLSAAGLPLSLFDAIVSADAFENLKPAPDIFLAASKILGVDPSEC
LVIEDALAGVQAANAAKMRCIAVMTTLTEEALGQASPTLVKKDIGDISINDILYGGSVSS
PIGADGRQQSSESTGKISEGLYFENASSKGPNGKISEDKSSQKIDFLGGLLGSRREVLRY
GSLGIAVVSFFISLRNWKAMQFASPKGLLNFFMGQNRSILSGKEGDSQSTRKQQIKTYLA
DLEARASDANVPEFPAKLEWLNSAPLQFSRDLKGRIVVLDFWTYCCINCMHVLPDLEYLE
NKYKNEPFTVVGVHSAKFDNEKDLEAIRNAVLRYNVSHPVVNDSNMYMWRELGINSWPSF
VIVGPTGKILAQLSGEGHRKDLDDVVDAALEFYGENKLLENKPLPLALEKDNDSRLLKSP
LKFPGKLAIDVQNNRLFISDSNHNRIVVTTLDGNFITQVGSTGEEGLNDGSFNIALFNRP
QGLAYNPKKNVLYVADTENHALREIDFVNETVRTLAGNGTKGSDYRGGGQGSSQVLNSPW
DLCYEPLNETVYIAMAGQHQIWEHRITDGVTRAFSGNGYERNQNGSSSTSTSFAQPSGIS
LSPDMQEAYIADSESSSIRAVNLKTGGSRLIAGGDPYLPENLFRFGDQDGVGSDALLQHP
LGVLCGSDNQIYIADSYNHKIKLIDPVTKRVRTLAGTGIGGFKDGAVLSAQLSEPAGLVE
AENRRLLIADTNNSVIRYIDLNDKNLQLLTLELKGVKPPSAKPKSLKRLRQRLPADVQII
KVDAGKAKEGYLSLQFSVPDGYHFSKEARSKFEVDIEPASAVELEPSSGYLNPDGSASIY
FKRASPSPSTGRINCKVYYCKEDEVCLYQPVAFDVSFQQEESESNYPANININYAVIPKV
TSGISQLIFSK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaatctcaccaccccaacctttcgacttatccctcgcaattatcggaagcac
ccttgtagtttccccaaattcgctccacctcccagcacatcccctcccgtagctgggaac
ctagcggtgttcttccagcggaggcggagctacgtgaaagcacaacagaaagcagagatg
gcgacagtaggaggtgaagtggtgacacaaggggagaactggggaaaggtatcagctgtg
ctgtttgatatggatggagttctctgtgacagtgaggaactgtctcgattggctgcggtg
gatgtctttgcggaccttggtgtggctgttaccactgaagatttcgttcctttcatgggc
actggtgaggctaaattcctaggtggtgtagctaaagtaaagggattaaacgacttaacc
ccggaggacctgaagaaacggttttttgaaatttatctcaacaagtatgcaaagccagac
tcgggaataggtttccctggtgcgcttgagctaataaaggagtgcaaacaaaaaggactc
aaggtggctgttgcttcgagtgctgatagaatcaaggttgatgcaaacttatctgccgct
gggttacctctttccttgtttgatgcaattgtgtctgccgatgcttttgaaaatttgaag
ccggctcctgatatatttttggcagcatcaaaaatcttaggtgttgaccctagtgagtgc
cttgtaatagaagatgctcttgctggagtgcaagctgccaatgctgctaaaatgagatgc
attgctgtgatgactactttaactgaagaggctcttggtcaagccagtcctactctcgtt
aagaaggacattggagatatttcaattaacgacattttgtatggtggttctgttagttca
ccaattggtgcagatgggaggcagcaaagttcagaaagtacaggcaaaatatctgaaggc
ctgtatttcgaaaatgcttcttcaaagggacctaatggtaaaatctctgaagacaaaagc
tctcagaagattgacttccttggagggcttctaggctctcgccgagaagtattaagatat
ggaagtctgggaatcgccgtagtttctttcttcatttcccttagaaattggaaggcgatg
caatttgcctctcctaaaggcctactcaattttttcatgggtcagaaccgttcaatattg
agtgggaaagaaggagattcccaatccactagaaagcaacaaataaagacttaccttgct
gatttagaagctagggcatcagatgcaaatgtgcccgagtttccagcaaagcttgagtgg
ttgaactcagctcctcttcaatttagcagggacttaaaagggagaatagttgtgctagat
ttttggacttattgttgcataaactgcatgcatgttctccctgatctggagtatctagag
aacaagtataagaacgagcctttcactgttgttggagtgcattctgcaaaatttgacaat
gagaaggatcttgaagcaatccgtaatgctgttttgcgatacaacgtgtctcatcctgtt
gttaatgatagcaacatgtacatgtggagagaactgggaattaactcctggccatcattt
gttattgtgggacccaccgggaaaatcttggcacagttatcaggtgaaggccatcggaag
gatctggatgatgttgttgacgctgcactagagttctatggcgaaaataaattactggaa
aacaaaccccttcctttggctttagaaaaagataatgacagtcgtttgttaaaatcacct
cttaagttccccgggaaacttgcaattgatgtgcaaaacaatagattgtttatatcagac
agtaaccacaatcgaattgtagttacaacactggatgggaattttatcactcaagtgggt
agcactggagaagaaggattgaatgacggttccttcaatattgctttgtttaaccgccct
caaggtcttgcatacaatccgaagaagaatgtcctttatgtcgctgacactgaaaatcat
gctttaagggagattgattttgttaatgagactgttagaactcttgctggaaatggaaca
aaaggttctgattatagaggaggtggtcagggaagttctcaggttttaaattcaccatgg
gacctttgctatgaacctttgaatgaaactgtgtacatagccatggccgggcaacatcaa
atatgggaacatagaataactgatggtgttactagagcttttagtggtaatggttacgag
agaaaccaaaatggatcaagttccacaagcacatcatttgcgcaaccttcgggaatttca
ctgtctcctgatatgcaggaggcttacattgctgatagtgaaagcagttcaatccgagct
gtaaatctgaaaactggagggtccagattgatagctggtggtgacccatatttaccagag
aacttatttaggtttggagatcaagatggagtaggatcagatgcactccttcagcatcca
ttaggtgtcctgtgtgggtcagataatcagatttacatagctgattcatacaaccacaag
ataaaattgatagatccagttacaaaaagagtcaggactttagctggaactggaattgga
gggttcaaagacggtgcagtcttatcagctcagctttctgaacccgccgggcttgttgaa
gcagagaaccgtaggctcctaatagcggatacaaacaacagtgtgatcaggtacattgac
ctgaatgataagaatctccaattgcttacactggaattgaaaggtgtgaaacctccttcg
gcaaaaccaaagtcattgaagcgactgaggcagcgcttaccggctgatgtgcaaattatt
aaggttgatgctggtaaggccaaggaaggatacctgtcactccaattttcagtacctgat
ggttaccatttctctaaggaagcacgtagcaagtttgaggtggatattgaacctgcaagt
gctgttgaactggagccctccagtggatacctaaacccagacggttcagcatccatttat
ttcaagagggcctctccttctccgtcaactggtagaataaactgcaaggtgtactattgt
aaggaggatgaggtttgtctgtaccaacccgtagcttttgatgtgtcgtttcaacaagag
gaatcagagtctaactacccggcaaatattaatattaattatgctgtcataccgaaagtc
acttcaggtatttcacagctaattttctccaaatga
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