KEGG   Carex rostrata (bottle sedge): 144555347
Entry
144555347         CDS       T11623                                 
Name
(RefSeq) uncharacterized protein LOC144555347
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot03060  Protein export
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    144555347
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:crot02044]
    144555347
Secretion system [BR:crot02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   144555347
SSDB
Motif
Pfam: SRP54 SRP-alpha_N SRP54_N AAA_22 nSTAND_NTPase5 AAA_17 AAA_16 MMR_HSR1 MeaB AAA_30 AAA_33 AAA_19 CbiA CLP1_P nSTAND3 DUF190
Other DBs
NCBI-GeneID: 144555347
NCBI-ProteinID: XP_078159769
LinkDB
Position
6:complement(2214124..2220513)
AA seq 619 aa
MLEQLLIFTRGGLVLWSSCRAIGNALKGSPIDALIRSCLLEERSADSSFSHESYTLKWAF
HNELGLVFVAVYQRILHLLYVDDLLSSVRREFSAVYDPKRTVYNDFDETFRQLQMEAEAR
VEEMKKLKQSGRAPPVQSKKGGAGQRALTGSQGNGTKKGSGGGSTKDDSDGDTGNGRLVS
NGVENGAKGSNKSRVPSKGKENGAPDTGAFDVNKLMMRSKTGKKSDDDKKAGPTKGQPKK
AVKKKRVWDDAPKEEPKLDFTDEKGDEGMEREVAVIRGESMMDKEEVISSESEGEEEDED
EVEGAKPGAKKKGWFASMFKSIAGNNSLEKADLQPALRALKDRLMTKNVAEEIAEKLCES
VANSLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVHAAKEQGRPYVVVFVG
VNGVGKSTNLAKVAYWLLQHDVSVTLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP
AIVAKEAIQDAARNKSDVVLVDTAGRMQDNEPLMRALSKLINLNNPDLVLFVGEALVGND
AVDQLSKFNQKLADLSTVANARLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQ
SYTDLKKLNVKSIVKTLLK
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgctggaacaactcttgatcttcacacgaggcggcctcgtgctgtggtcgtcatgccgt
gcgattgggaacgctctcaagggttctccaattgatgccttgatcagatcgtgcctcctg
gaggagcgttcggcggattcctctttctcccatgagtcgtacacactcaagtgggccttc
cacaacgagcttggcctcgtatttgttgctgtgtaccaacgtattctccaccttctgtat
gtagacgatctgctttcgtcggttcgtcgggaattctctgctgtttatgatcccaagcgc
acagtttacaatgattttgacgagacttttcggcagcttcagatggaggcagaggcacgt
gtggaggagatgaagaagttgaagcagtctggccgggccccaccagtacagtctaagaaa
ggtggtgctgggcagcgtgctcttaccggctcccaaggtaatggtaccaagaagggaagc
ggtggtggttctacaaaggatgattctgatggtgatactggaaatggtaggttagtatct
aatggggtagagaatggtgcgaagggttccaacaagtcccgtgtacctagtaagggcaag
gagaatggcgcacctgatacaggggcgtttgatgtaaataagctgatgatgcggtcgaag
accgggaagaagagtgatgatgacaagaaggcaggtcccactaagggacaacccaagaag
gcggtaaagaagaaaagggtttgggatgacgctccgaaagaggagccgaagttagatttc
actgacgagaaaggggatgaggggatggagcgtgaggtggcggtgattcgtggagagagc
atgatggataaagaggaggtgattagtagcgagagtgagggagaagaggaggatgaggat
gaggttgagggtgcaaagccaggggctaagaagaagggttggtttgcttccatgtttaag
agtattgctggcaacaactctcttgagaaagctgatcttcaaccagcactgagagctctc
aaggataggctaatgactaagaatgtggctgaagaaatagctgaaaagctttgtgaatca
gtggcgaacagtcttgaaggaaagaagcttggatctttcaccagaatatcctccactgtt
cagacagcaatggaagaagcacttcttcgtatcctgaccccaagacggtctattgacatc
ttacgagatgttcatgctgccaaggagcaaggaaggccatatgttgttgtctttgtcgga
gtaaatggtgttggaaaatccactaaccttgccaaggttgcatactggcttctccaacat
gatgtgagtgtcacgcttgcggcttgcgataccttcaggtcaggtgcagttgagcagctc
aggactcatgcacgtcggcttcagatacctatattcgagaaggggtacgaaaaggatccg
gcaattgttgctaaagaagctattcaagacgccgctcgtaataaatcagatgttgttctt
gttgatacagctggccgcatgcaggataatgagccactgatgagggcattgtccaagctg
atcaacctcaataatcctgatctggttttgtttgttggagaggcacttgtcggtaacgat
gcagttgatcaactctcaaaattcaatcagaaattggctgacctttctactgttgcaaat
gcaaggctgattgatggtatcttgctcactaaattcgacacgattgatgataaggttggt
gcggcgctttctatggtatacatatctggagctcctgtgatgtttgttggctgcgggcaa
tcgtacaccgacctcaagaaactgaacgtcaaatctatagtcaaaactctcctcaagtga

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