Carex rostrata (bottle sedge): 144557956
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Entry
144557956 CDS
T11623
Name
(RefSeq) ubiquitin-activating enzyme E1 1-like
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
144557956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crot04121
]
144557956
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crot04147
]
144557956
Enzymes [BR:
crot01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
144557956
Ubiquitin system [BR:
crot04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
144557956
Exosome [BR:
crot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
144557956
Exosomal proteins of other body fluids (saliva and urine)
144557956
Exosomal proteins of colorectal cancer cells
144557956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_FCCH
E1_UFD
E1_4HB
BilD_C
Motif
Other DBs
NCBI-GeneID:
144557956
NCBI-ProteinID:
XP_078162757
LinkDB
All DBs
Position
1:complement(10316123..10323445)
Genome browser
AA seq
1068 aa
AA seq
DB search
MLPRKRDTESEVEQRGESPNSNPSKKGKASLSPSSSMNPPSKNSMDIDVVNGTGASSVEI
DEDLHSRQLAVYGRETMRRLFASNVLISGLQGLGAEIAKNLVLAGVRSVTLHDEENIELW
DLSSNFFFSESDIGKNRALSCVQKLQELNNAVLISTLTGPLEKEQLSNFQAVVFTDIPLE
KAIEYDDYCHTHNPPIAFIKSEVRGLFGNIFCDFGPEFAVLDVDGEEPHTGIVASISNDN
PALVSCVDDERLEFQDGDLVTFSEIKGMTELNDGKPRKVKSARPYSFMLEEDTSNFGVYD
RGGIVTQVKLPKVLKFRPLCEAIKEPGEFLLSDFSKFDRPPLLHIAFLALDKFRSEMGRF
PVPGSEDDLQKLIDLAAGINQTMGDGSKVEEIDKKLMHHFANGARAVLNPMAAMFGGIVG
QEVVKACSGKFHPLFQFFYFDSMESLPTEPLDADDLKPLNSRYDAQISVFGSKLQKKLQE
SKIFMVGSGALGCEFLKNLALMGVSCTQKGKLTITDDDVIEKSNLSRQFLFRDWNIGQAK
STVAAAAASVINPNLHAEALQNRASPDTENVFNDAFWESLDAVINALDNVTARMYIDSRC
LYFQKPLLESGTLGAKCNTQMVVPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWA
RSEFEGLLEKTPNEVNSFLSNPDGYASGMRSAGDAQARDQLERVLECLDRERCETFEDCI
TWIRLKFEDYFANRVKQLTYTFPENSMNSSGTRFWSAPKRFPRPLEFSTSDLSHLHFIMA
GAILRAETFGIPTPDWAKDPKKLAEAIDKVIVPEFQPKQGVKIETDEKATNLSTASIDDA
AVINELIVKLEDCAKVLSPGFKMNPIQFEKDDDTNYHMDLIAGLANMRARNYSIPEVDKL
KAKFIAGRIIPAIATSTAMATGLVCLELYKVLAGSHKVEDYRNTFANLALPLFSMAEPVP
PKTIKHQDMEWTVWDRWTINGDITLRELLQWLKEKGLNAYSISCGTSLLYNSMFPRHKER
MDKKVVDVARDVAKVEVPQYRRHLDVVVACEDDDDNDIDIPLVSVYFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctaggaaacgagacacggaatctgaggtagaacaaagaggtgaaagccccaat
tccaacccaagcaagaagggcaaagcatctctctctccctcctcctccatgaatccacca
tcaaagaacagcatggatatcgatgttgtgaatggtacaggtgccagctcggttgagatt
gatgaggatcttcacagccgtcagctggctgtttatggacgtgagaccatgcgccgattg
tttgcttccaacgtgctaatttcaggtctccagggacttggtgctgaaattgcaaagaat
cttgttcttgcgggggtgaggtcagtgacgctccatgatgaagaaaatatagaattgtgg
gacctatctagtaatttctttttctcggagagtgatattggtaaaaatcgtgccctttct
tgtgtccagaagctccaagagctgaacaatgctgttctgatatctacactaacaggtcct
cttgagaaggagcagctctccaatttccaggctgtggtcttcactgacatccccttggag
aaagctattgaatatgatgactactgccacacccacaacccacccattgctttcatcaaa
agtgaggtcaggggtctttttgggaacatattttgtgactttggccccgagtttgctgtc
ctggatgtggatggcgaggagccgcatactggcatagttgcttcgatcagtaatgacaat
cccgcgcttgtctcctgtgtggacgatgagcgccttgagttccaggatggggatctcgtt
actttctctgaaatcaagggcatgactgaactaaacgatggtaaacccagaaaggtcaaa
agcgcacggccttattcgttcatgcttgaagaggatacttcgaactttggggtgtatgat
agaggcggtatagtcacacaagtgaagctccctaaggttttgaaattcaggccattatgt
gaggccattaaggagccaggggagtttctgttgagcgatttttcgaagttcgaccggcca
cctctcttgcacattgccttcttggctctggacaagtttaggagtgaaatggggcggttt
ccagtgccgggatctgaggatgatcttcaaaagctgattgatcttgcggcggggattaat
cagaccatgggagatggtagtaaggtggaggaaattgataagaagttgatgcaccatttt
gctaatggggcgagagcagttttgaacccaatggctgccatgtttggtggcattgttggt
caagaggttgtcaaggcttgttcgggaaaatttcaccctcttttccagttcttctacttt
gattcaatggaaagtcttcctacagaacccttggacgctgatgacctcaaaccactcaac
agtcggtatgatgcacaaatctccgtattcggatccaagctccaaaagaaactccaagaa
tccaaaattttcatggtgggttctggtgcgcttggctgcgagttcctgaaaaaccttgca
ttgatgggcgtatcctgcacccaaaaaggaaaactaaccataactgacgatgatgtcatt
gagaagagcaatttgagccgtcaatttctctttcgtgattggaacattggtcaagccaaa
tcgactgttgcggctgctgctgcttctgtaataaaccctaatttgcacgcagaggccctt
caaaaccgtgccagcccagatactgaaaatgtgtttaacgacgccttttgggaaagtctt
gatgctgtaatcaatgctttggataatgtcactgcacgaatgtacattgattcaaggtgt
ctgtatttccaaaagccacttttggaatctggcacgctcggtgcaaagtgtaacacacag
atggtcgtaccacacctgacagaaaattatggtgcttcacgggacccacctgagaagcaa
gcacccatgtgcacagtgcactctttcccccataacattgaccactgcttgacttgggct
cggtcagaatttgaggggcttctcgagaagacaccgaatgaggtcaatagctttttgtcg
aaccctgatggatacgcctcggggatgcgaagtgctggtgatgcacaggccagagaccaa
cttgagcgtgtcttggagtgccttgacagggagagatgtgaaacgtttgaagattgcatc
acctggatacgcctcaagtttgaggactactttgccaaccgggtgaagcagctaacctac
accttcccagaaaactcgatgaatagctccggtactcgtttctggtcggcccctaagagg
ttcccccgcccccttgagttcagcaccagtgacctgagccacctccacttcatcatggcc
ggggccatacttcgggccgagacttttggcattccgacccctgattgggctaaggacccc
aagaagttagcggaagccattgataaggtgattgtgccggagtttcagccgaagcaggga
gtgaaaattgaaactgacgagaaggcaacaaatttgtcgacagcgtccattgatgatgca
gctgtcattaacgaactgattgtgaagctcgaggattgtgccaaggtgctatcgcctggg
ttcaaaatgaacccaatacagtttgagaaggatgatgacacaaactaccacatggacctg
atagcgggtctggccaacatgcgggctcgcaactatagcatacctgaggtggacaagctg
aaagccaagttcattgccggccgcatcataccggccattgccacctccactgccatggct
accggtctcgtctgcctcgagctctataaggtccttgccgggtcgcacaaggtcgaagat
taccgtaacacctttgccaatctggccctccccctcttctccatggctgaacccgttcca
ccaaagaccatcaagcatcaggacatggaatggaccgtgtgggaccgatggacgatcaac
ggggacatcactctgagagaactgctgcagtggctcaaggagaagggcttgaatgcatat
agcatttcatgtggcacctctctgctttacaacagcatgttcccaaggcacaaggagaga
atggataagaaggtggttgatgtggccagggatgtggccaaggttgaggtgccacagtac
cggcgccatctggatgtcgttgttgcctgtgaggatgacgatgacaacgacatcgacatc
ccccttgtttcggtctattttcgttga
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