Carex rostrata (bottle sedge): 144558965
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Entry
144558965 CDS
T11623
Name
(RefSeq) histone acetyltransferase GCN5-like
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
crot
Carex rostrata (bottle sedge)
Pathway
crot03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
144558965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crot03021
]
144558965
03036 Chromosome and associated proteins [BR:
crot03036
]
144558965
Enzymes [BR:
crot01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
144558965
Transcription machinery [BR:
crot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
144558965
Chromosome and associated proteins [BR:
crot03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
144558965
HAT complexes
PCAF complex
144558965
STAGA complex
144558965
TFTC complex
144558965
SAGA complex
144558965
SLIK complex
144558965
ADA-HAT complex
144558965
HAT-A2 complex
144558965
ATAC complex
144558965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
144558965
NCBI-ProteinID:
XP_078163977
LinkDB
All DBs
Position
9:complement(2952022..2958290)
Genome browser
AA seq
558 aa
AA seq
DB search
MDGHGSAPVRSRSSQSPSPSHSHSHSASASASSSAHHHPKRKFSAVSPATAAAAAAAFDT
ETPDDNDDSEEEELPPENDDSDEDDVVTSNDDEDEDKNLNSNNGSNVNNDSIRNFTAARM
ARTVKQERDVGGLVKVEPGGGDGMIGVVKEERVSGQTGTGGSVGLTPGIVVKEENGKGIF
TDIQTSGAYTAREEGLKREEEAGRLQFFCCSNDGVDQHMIWLIGLKNIFARQLPNMPKEY
IVRLVMDRTHKSMMVIRNNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHL
KQHARDIDGLTHFLTYADNNAVGYFIKQGFTKEITFDKNRWQGYIKDYDGGILMECKINP
KLPYTDIATMIRRQRQAIDEKIRELSNCHIVYEGIDFQKKEAGIPKKMLKVEDIRGLKEA
GWTPDQWGHSRLKTPNSMVDSVQYRQHLNNFMRALLKTMNEHPDAWPFKEPVDAREVPDY
YDIIKDPMDLKTMSKRVESELYYVTFEMFVADVKRMFHNARTYNAPETIYYKCATRLENH
FSNKVQANFQTATKPLLH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcatggatccgctccggtccgatcgcgcagctctcagtcaccttcaccttct
cactcgcactcacactccgcctccgcctctgcatccagctcggcgcaccaccaccccaag
cgcaagttttccgccgtctccccagctactgcagctgctgcggccgcggcttttgacact
gagaccccagacgacaacgacgactccgaggaggaggagctcccgccggaaaacgatgac
tctgacgaggatgacgttgtcacctcgaacgatgacgaggatgaagataagaatctcaat
agcaataacggtagcaacgttaataatgattccatcaggaattttactgctgctaggatg
gctagaacagtgaagcaggagagagatgtgggtggcttggtgaaggtggaaccgggcgga
ggggatggcatgataggagtggttaaggaggagcgggtgtctggtcagacgggtacgggt
ggaagtgtgggattgacgccggggatagtggtgaaggaggaaaacgggaaggggattttc
acagatattcagacaagtggggcctacactgccagagaggaaggtcttaagagagaggaa
gaggctggaagacttcaattcttctgttgttcgaatgatggtgttgatcaacacatgata
tggctaataggattgaagaatatatttgctaggcaacttccaaatatgcccaaagagtac
attgttcgccttgtcatggatagaacccacaaatcaatgatggttatccggaacaatcat
gttgttggaggtattacataccgtccttatgcaagtcagaaatttggggagatagccttt
tgtgcaataacagctgatgagcaagtaaaaggatatggtaccagattaatgaatcattta
aagcaacatgctcgggatattgatggcctcactcatttcctaacttatgctgataataat
gctgttggctacttcataaagcaggggttcacaaaggaaataacatttgacaagaacaga
tggcagggatacatcaaggattatgatggagggatattaatggaatgcaaaattaatcca
aagcttccttacactgatatcgctaccatgattcgccggcaaagacaggcaattgatgag
aaaatcagagaactttctaactgccatattgtctacgaaggaattgacttccaaaagaaa
gaagctggcattccaaaaaagatgttgaaagttgaagatattcgtggtctcaaggaagca
ggatggacacctgaccagtggggccattcaagattgaagacccccaattccatggtcgac
tctgtccaatatcgtcagcatctcaataacttcatgcgtgctctcttgaagacaatgaat
gaacatcctgatgcatggccatttaaggagccagtcgatgcacgtgaggttcctgattac
tatgacatcatcaaggatccaatggatttgaagactatgtcaaagagagtagaatcagaa
ctgtactacgtaacatttgagatgtttgttgctgatgttaagagaatgtttcacaatgct
cgcacatataatgcacctgaaaccatctactacaaatgtgccactcggcttgagaatcac
ttctctaacaaggtccaggctaactttcagactgccaccaagcctttgttgcattga
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