Carex rostrata (bottle sedge): 144559386
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Entry
144559386 CDS
T11623
Symbol
ASG2
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
crot
Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crot04121
]
144559386 (ASG2)
Ubiquitin system [BR:
crot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
144559386 (ASG2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
NBCH_WD40
TRM82_WD
Beta-prop_HPS5
ASA1
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Protamine-3
Byr4
Beta-prop_IFT140_1st
TPR_2
DNA_pol_phi
TPR_19
TPR_16
HEAT_UBR5_2nd
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
144559386
NCBI-ProteinID:
XP_078164529
LinkDB
All DBs
Position
9:complement(5839203..5849343)
Genome browser
AA seq
770 aa
AA seq
DB search
MDKLHWSFPDGNISDHIERRRLDSIKGTNRNLQFHSSLVQRLALEKEMEGHLGCVNAIAW
NSKGSLLISGSDDTKINIWNYTDKKLRHSIDSGHSTNIFCTRFVPETSDEVVVSGAGDAE
VRVFNLSRVRPRVQEVAPVPAALYRCHTRRVKKLAVEVGNPNIVWSASEDGTFRQHDFRE
CSSCPPAGSTTQECRNILIDLRSGAKKSLAAFPRQCLSLKSCDISPTRPHQILVGGSDAF
ARLYDRRMLPPLSSCRTTAKPPPYVNYFCPVHLAEPRKSSLHLTHVAFSPNGDEVLLSYS
GEHVYLMDVTSDSGKNAMRYSTGDIQKCLYVPPFPAVPYQPSSWPSISVKPSTKYSSQKL
EVRKKLVQFATKCLDNLSDYSSDYLYGIDACNEVLDGKGPDIGSSLRHDCLCIRAALLLK
RKWKNDAYVAIRDCNSARLLDASSFRAHFHMAEALLQLGRLKDAMLYANASSNLVPSISD
ARKKLDALKESIATAEAQKGRRLHEDGTSNGVNRARIRSISDVLLAASNMSGPSSQREEE
EEEEEEEEEEEENEYFSDYDNEMELDFDASVSGEDTGENEIDSRVVRGSLSVLLHRGSGN
SGKDESVANVSSSDDSLSQPEVAVDMKQRYVGHCNVGTDIKQASFLGQRGEFIASGSDDG
KWFIWEKQTGRLVKMLAGDEAVVNCIQAHPSDCAVATSGIDNTIKIWTPIAGAASRVAGG
AAGPETSDVLKAMQVNQRQLSHSREIMLPLELLERIRMHEFTESLECTQT
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggataaattacactggagcttccccgatgggaatatttctgatcatatcgagaggcgg
cgactggattcgattaagggaacaaacaggaacttgcaatttcattcctctctggtgcaa
aggcttgccttggaaaaagagatggagggccaccttggctgtgtcaatgctattgcgtgg
aactccaagggttctctcttgatatcgggttctgatgacacaaagattaacatatggaac
tatactgataagaagcttcgtcatagcatcgatagtggccattctaccaacatattttgc
accagatttgtaccagagacatctgatgaggtggtagtgtccggagccggagatgcagag
gttcgtgttttcaacttatctcgtgtgagaccgagggttcaagaagttgctcctgtacct
gccgctctgtaccgatgtcacaccaggagggttaagaaactagctgtggaggttggtaac
cctaacatagtttggagtgcaagtgaggatggcactttcagacagcatgactttcgcgag
tgctcttcttgccctcctgcagggtccaccactcaggaatgccgcaatatacttattgat
ttacgtagtggtgccaaaaaatctttggcggcttttccaaggcaatgcttgtctcttaag
tcatgtgacatcagccccacacggccccatcaaattcttgtaggcgggagtgatgctttt
gctcggttatatgacagaagaatgctccctcctcttagctcatgccgtaccacagctaag
ccgcctccttatgtcaactatttctgtccagtacaccttgctgagcctaggaagtcgagc
ttgcacctcactcatgttgcattcagtccgaatggtgatgaggttcttttaagttatagt
ggtgaacatgtgtacctaatggatgttacctctgatagcggtaagaatgcgatgagatat
agcacaggtgatattcagaagtgcttgtatgttccaccattcccagcagtgccataccag
ccttcatcttggccaagtatttccgtaaaaccttcaacaaaatattcttcgcagaagctt
gaggtgcgaaaaaaattggtgcaatttgcaaccaaatgcttggataatttatccgattat
tcatccgattatctgtatggaatagatgcttgcaatgaggtgcttgatggaaaaggtcct
gacatcgggtcttcattaaggcatgattgcttgtgcattagagctgctcttttgctaaag
agaaaatggaagaatgatgcatacgtggctattagggactgtaacagtgctcgcctgttg
gatgcttcttcattcagagcacattttcatatggctgaggctcttcttcagttggggagg
ctgaaggacgctatgttatatgccaatgcatcaagcaatctagtgccatccatatctgat
gctagaaaaaaattagatgccttaaaagagagcattgctacagctgaagcacaaaaggga
agaaggttgcacgaagatggtacatccaatggggtgaatcgtgctaggattagatcaata
agcgatgtactcctggctgcatctaacatgtcgggaccatccagccagagggaagaagaa
gaagaagaagaagaagaagaagaagaggaggaggaaaatgagtatttctctgactatgat
aatgaaatggaacttgattttgatgcatcagtttctggtgaagatactggtgagaatgag
attgattcaagagtcgtgcgcggtagtttgagtgtactgttgcatagaggtagtggtaac
tcgggcaaggatgagtcggttgccaatgtctcttcttctgatgattctctgtctcagcct
gaagtagcagttgatatgaagcaaagatatgttgggcactgcaatgtaggaacagatatt
aaacaagctagtttccttggtcaaaggggagagttcattgcaagtggaagtgatgatggc
aaatggtttatttgggaaaaacaaactggaagacttgtaaagatgcttgctggagatgag
gccgtggtaaactgcatacaagctcatccctctgactgcgctgttgcaaccagtggcatt
gataacacaataaagatttggactccaattgcgggagcagcatctcgggttgcaggaggt
gctgcaggcccagaaacatcagatgtactaaaagcaatgcaggttaaccaacgccagctc
agccacagccgtgaaatcatgctaccactggaactactggagaggatcaggatgcatgag
ttcactgaatctttagaatgcactcaaacctga
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