Carex rostrata (bottle sedge): 144560141
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Entry
144560141 CDS
T11623
Name
(RefSeq) KH domain-containing protein At5g56140-like isoform X1
KO
K14945
protein quaking
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crot03041
]
144560141
Spliceosome [BR:
crot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
144560141
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Ortholog
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GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
HHO5_N
KH_KRR1_2nd
Qua1
Motif
Other DBs
NCBI-GeneID:
144560141
NCBI-ProteinID:
XP_078165434
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Position
10:13202787..13207915
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AA seq
282 aa
AA seq
DB search
MSSGRYMAYSPSPSTTPHSPHLPGLRAPITDQEKYLTELLAERQKLSPFLPVLPHCYRLL
NQEILRVSAVLENASQLLEHGSPLTTGGLFSNGGNADLNGWGSSFQSEQSSGHSWLGSQG
SSSGLVVKKTIKVDIPVDQYPTQYNFVGRILGPRGNSLKRVEATTDCRVLIRGRGSIKDP
ARVRLEEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFF
KKQQLRELAMLNGTLRDDGMQRSGSASPFNNSLGMKRAKTRG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaggccggtacatggcgtattccccttctccctccaccacgcctcactcgcca
cacctccctggtctcagggccccgatcacagatcaagagaaatatcttacagaactgctt
gcagaaagacagaagctcagtccttttcttccagtccttccccattgctacaggttgctg
aatcaagaaatattgcgtgtgtcagcagtattggagaatgcatcacaactattagaacat
ggtagcccactaacaactggaggcctcttttctaatggtggcaatgctgacttaaatgga
tggggctcctctttccaatctgaacagtcatctggtcatagctggcttggatctcaaggc
agttcgtctggtcttgttgtcaagaaaaccatcaaagttgacatccctgttgaccaatac
cccactcagtacaattttgttggacgaatcctgggtccaagaggtaattctcttaagcgc
gtggaggcaaccaccgattgccgtgttcttatcagaggccggggaagcattaaagaccct
gcccgggtacgcttggaagagatgatgagagggaaaccagggtatgaacacctgaatgaa
cccctccacattttagttgaggccgagcttcctgttgaaattattgatgcacgactcatg
caagctcgtgagatcttggaagaccttctcaaacctgtggatgaatcacaagatttcttc
aagaagcaacagctgagagaactggccatgctcaatggcacacttcgtgatgatgggatg
cagagatcaggctcagcctctcctttcaataacagcctcggcatgaagagagcgaagaca
aggggctaa
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