Carex rostrata (bottle sedge): 144560337
Help
Entry
144560337 CDS
T11623
Symbol
CALS5
Name
(RefSeq) callose synthase 5 isoform X1
KO
K11000
callose synthase [EC:2.4.1.-]
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crot01003
]
144560337 (CALS5)
Glycosyltransferases [BR:
crot01003
]
Polysaccharide
Structural polysaccharide
144560337 (CALS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glucan_synthase
CALS1
FKS1_dom1
Vta1
Motif
Other DBs
NCBI-GeneID:
144560337
NCBI-ProteinID:
XP_078165627
LinkDB
All DBs
Position
10:8887022..8904538
Genome browser
AA seq
1941 aa
AA seq
DB search
MAGASSVSDNASSSAAPTPGPLSGPQALTRRPSRSAAMATFSMEVFDNEVVPPTLSSIAP
ILRVAAEIESERPRVAYLCRFYAFEKAHRLDPSSAGRGVRQFKTGLLTRLERDNTPTLAK
RVKKSDAREIESFYQQYYENYVRALDRGEQADRAQLGKAYQNAGVLFEVLLAVTKSEKGE
EVAPEIIAANKDVQEKNQIFVPYNILPLDAAGSSQCIMQQEEVKAAVAALKNTRGLTWPI
PFEQQKQKSGELDLLDWLRSMFGFQRDSVRNQREHLILLLANVHVRLTPKPEPLTKLDER
AIDAVMNKLFKNYKNWCKFLGRKHCLHLRHSQGTQPQETQQRKILYMGLYLLIWGESANI
RFMPECLCYIFHNMAYELRGLLENNISIVTGENIRPSYGGDDEAYLKKVVTPIYRVIERE
ASKSKNGKAPHAAWCNYDDLNEYFWSPDCFTLGWPMNDNAEFFKSIHGVIPTARGVARGG
SGKSIGKSNFVETRTFWHIFRSFDRLWTFYILALQAMVIITWSGQSLTKIFNKNTLYSLS
SIFITAAFLRFLQSLLDLILNFPGYHRVKFNDVMRNLLKIIMSVAWCIILPLFYVNSSTN
VNLPFDLTKYLRQIKGVPQLYLFAVALYLLPNILAAALFVFPMFRRWIENSDFILIRFLL
WWSQPRIYVGRGMHESQWSLFKYTLFWFLLLCCKFAFSFYMQIKPLVQPTKDIMNIRNIK
YQWHEFFPNARNNIGAVVSIWAPVILVYFMDTQIWYAIFSTIYGGISGAFGRLGEIRTLG
MLRSRFSSLPGAFNTYLVPDDRARRRGFTLAKRFAEANPNKRTEAAKFAQLWNEVICSFR
EEDLISDREMDLMLVPYSSDPSLKLIQWPPFLLASKIPIALDMAVQFRSRDFDLWRRICA
DEYMKCAVLECYESCKLVLNLLVVGETEKRIIGIIIKEVEANIAKNTFLANFRMSAMPVL
VKKYIELVGILKEGDESKRDAVVLLLQDMLEVVTRDMMVNESRELVELGHGNKESVTRGQ
QQQLFAATGSRASIQYPPVVTAQWEEQIKRLYLLLTVKESAMEVPTNLEARRRIAFFTNS
LFMDMPRAPRVRKMLSFSVMTPYYSEETVFSRNDLDMENEDGVSIIFYLQKIFPDEWNNF
KERINCKKDYEIFENDENILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMASEEE
ILEGYKAVADQAEEEKRQRSMSAQLEAIADMKFTYVATCQIYGNQKQSGDRRATDILNLM
VNYPSLRVAYIDEVEEREGDKVQKVYYSVLVKAVENRDQEIYRIKLPGPAKIGEGKPENQ
NHAVIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVS
SLASFMSNQETSFVTIGQRVLASPLKVRFHYGHPDVFDRIFHITRGGISKASRGINLSED
IFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRF
DFFRMLSCYFTTVGFYVSSMMVVIIVYMFLYGRIYLSLSGLEATIVRQAEMRGNRALESA
MASQSVVQLGLLMALPMVMEIGLERGFRTALGDFIIMQLQLCAVFFTFSLGTKSHYFGRT
VLHGGAKYRATGRGFVVRHVKFAENYRMYSRSHFVKGMELLVLLLVYEVYGSVATNTALY
ILLTFSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWDDWSKWIGSRGGIGVPANKSWESWW
DEEQEHLQSTGFLGRFWEILLSLRFFLFQYGIIYHLHIANGSKSIVVYGLSWLVIVAVVL
VLKVVSIGRKKFSADFQLMFRLLKLLLFIGFVGTLGILFTLLNLTVGDIFAAFLAFAPTG
WALLSVSQAIKPAVKALGLWGSVKALARGYEYIMGLVIFTPVAIMAWFPFVSEFQTRLLF
NQAFSRGLQISRILAGGKKQN
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggccggggcatcatcggtgtctgataatgcgtcctcgtcagcagctccgacgcctggt
ccactgtcgggcccacaggcgctgacgaggcggccttctagaagcgcagccatggcgacc
ttctccatggaggtctttgataacgaggttgtacctccgacgctgagtagtattgcaccg
atccttcgtgtggcagctgagatcgaatcagagaggcctcgtgttgcttatttgtgtcga
ttctatgcatttgagaaggcacatcggctggatccgagctcagctggtcgtggagttcgg
caatttaaaacaggacttttaacacgccttgaacgggataacacaccgactttagctaag
agagtgaaaaaaagtgatgcaagggaaatagagagcttctatcagcaatactatgagaac
tatgtgcgtgctcttgacagaggcgagcaagcagacagggcccagctcggtaaggcgtat
caaaatgcaggagttctttttgaagtgctacttgctgttaccaagtcagagaaaggggaa
gaagttgcaccagagatcattgcggccaacaaagatgtacaagaaaagaaccaaatattc
gtgccatataacattcttcccttggatgctgctgggtcttcacaatgtatcatgcaacaa
gaagaggttaaggcagctgtggcagctctgaaaaacacaaggggtctgacatggcccatt
ccatttgagcaacaaaaacaaaaatcaggcgagcttgatctgcttgactggttaagatcc
atgtttggttttcagagggacagtgtcagaaaccaaagagagcatttaatattattgctg
gctaatgttcatgtaagactcacaccgaagccagagcctcttactaagttggatgaaaga
gcaatagatgccgtgatgaataagctattcaagaattacaaaaattggtgcaagttcttg
gggaggaaacactgcttgcatttaagacattcccaagggacacaacctcaagagacacaa
cagaggaagattctttacatgggcttgtatcttctaatttggggcgagtctgccaacatc
cgtttcatgcctgagtgtctatgctacatctttcacaatatggcatatgagctccggggc
ctactggagaacaatattagcattgttacaggagagaatatcagaccttcttatgggggc
gatgacgaggcctatttgaagaaagtggttactcctatttatcgcgtcattgaaagggaa
gccagcaaaagtaagaatggaaaagcaccacatgcagcatggtgtaactatgacgatctc
aatgagtatttctggtcacctgattgtttcactttgggctggcctatgaatgacaatgca
gagttcttcaagtctatccatggagttattcctacagcacggggagttgcgaggggtggt
tctggtaagagtattgggaagtcaaactttgttgaaacgagaacattctggcatatcttt
agaagtttcgaccgtttgtggacattctatatattggctttacaggcaatggtgattatt
acatggagcgggcaatcattgacaaagatatttaacaagaataccctatattcattgtct
agcatctttatcactgctgcattccttcgcttccttcaaagtttactggacttaattctg
aacttcccgggttaccaccgggtgaagtttaatgatgtgatgagaaacctcctgaagatc
ataatgagtgtggcctggtgcatcatcctcccactcttttacgtcaactcttcgaccaat
gtcaacctcccttttgacctaaccaagtatcttcgccagatcaaaggcgtgccccaactg
tatctctttgctgttgcactgtacctcttgcccaacatcctcgctgctgctcttttcgtg
tttcccatgttcagaaggtggattgaaaattctgattttatcctcatacgcttcctcctc
tggtggtctcagccaagaatttatgttggacgtgggatgcatgagagccagtggtccctt
ttcaagtatacattattctggttcttgttgctctgttgcaagtttgcattcagcttctac
atgcagataaaacctttggtccagccaaccaaggacataatgaatattcgcaatatcaag
tatcagtggcacgagttcttcccaaatgctagaaacaatattggtgctgttgtctctatt
tgggccccagttatattggtctactttatggacacccaaatttggtatgcaatattctct
acaatttatggtggtatttctggagcatttgggcgacttggtgagatccggacacttggt
atgttgaggtcacgttttagctctttacctggagcctttaacacatacttggtgcctgat
gatagagccaggaggagagggttcactcttgccaagcggtttgctgaggccaatccaaac
aaaagaactgaagcagcaaaatttgctcaattgtggaatgaagtcatatgtagcttcagg
gaggaagacttgattagcgatagggagatggatcttatgttggttccctattcttcagat
ccaagtcttaagctgatccagtggcctccattcttgcttgctagcaagattccaattgct
ctggacatggcggtgcagttccggtcgagagatttcgatctctggaggcgtatctgtgct
gatgagtacatgaaatgtgctgttttagaatgctatgagtcttgcaaacttgtactcaac
ctcttggttgtaggagaaactgagaagaggataattggcattataataaaagaagtagag
gctaacattgcaaagaatacattccttgccaacttcagaatgagtgccatgccagttcta
gtcaagaaatacattgagcttgtcggcatcttgaaagagggggatgaatctaagagagat
gcagtagtgttgctgcttcaggatatgttggaagttgtaacccgtgatatgatggttaac
gagagcagggagctcgttgagctgggacatggtaacaaggaatcagtgacaagaggacag
cagcaacagctttttgccgcaacaggttcaagggcttcaattcaatatcctcctgtagtc
actgcgcaatgggaagagcaaattaagcggctgtatctccttctaactgtaaaagaatca
gccatggaagtaccaacaaaccttgaagccagaagaaggatagccttttttacaaattct
cttttcatggacatgcctcgtgctcctcgtgttcggaagatgctttctttcagtgtcatg
accccatactatagtgaggagacggttttctccagaaatgaccttgatatggaaaatgaa
gacggtgtttccattatattctacctccaaaagatttttccagatgagtggaataacttc
aaggagagaataaattgcaaaaaggattatgaaatttttgagaatgatgagaatatcctt
cagcttcgccactgggcctctcttaggggtcagacactatgtcgcacagttaggggtatg
atgtactacagaagggctctcaagcttcaagctttccttgatatggcttctgaagaagaa
attttggaaggctataaggcagtggcagatcaagcagaggaagagaagagacagaggtcg
atgtcagctcagctggaggctatagctgatatgaaattcacatatgtcgccacctgtcaa
atttatggtaaccaaaagcaatctggagatcgtcgtgctactgatattttgaacttgatg
gtcaactacccctcactaagagttgcatatatcgatgaagttgaagaacgagaaggtgat
aaagtacaaaaggtttactattctgtgctagtcaaagctgttgaaaatcgtgatcaggaa
atataccgcataaaactgccaggacctgcaaaaataggtgaaggaaagccggaaaaccag
aaccatgccgtaatattcacacgtggagaggctctccaaacaattgatatgaatcaggac
aactatttagaggaagcactgaaaatgcgaaaccttctagaagaattcaatgaagatcac
ggcgtgcgccctcccacaattcttggtgtacgtgagcacatttttactggaagtgtttca
tctttggcatcgttcatgtcaaaccaggagacaagttttgtcacaattggccagagagtt
ctcgctagtcccttgaaagttcggtttcactatggtcacccggatgtgtttgatagaatc
tttcacatcacgagaggtggcataagcaaagcttcccgaggaatcaacttatctgaggat
atctttgcgggttttaactcaacattgagacgaggaaacgtgacacaccacgagtacatc
caggttgggaagggacgtgatgtggggcttaaccagatctctctctttgaggccaaggta
gcatgcggtaatggagagcaaattttgagtagggatatctaccgcctcggccaccgattt
gacttcttccgcatgctgtcttgctacttcaccactgttggcttctatgtcagctcaatg
atggtcgtcatcattgtctatatgttcttatatgggaggatatacctatctctgagtggt
ttagaggctacaattgtgcggcaagcagagatgcgtggcaaccgagcccttgagtcagcc
atggcctcccaatccgtggttcagctcggtctcctcatggcacttcccatggtcatggaa
attggtctcgagcgtggtttccgcactgccttaggtgattttatcatcatgcaacttcag
ctctgtgctgtgttcttcaccttctcccttggtaccaagtcacactactttggtcgcact
gtcttgcatggaggtgccaagtaccgggccactggccgtgggtttgtcgtgcgtcatgtc
aagtttgctgagaactacaggatgtattccaggagccattttgttaaggggatggagtta
ctagtgctgcttcttgtttacgaggtctacggctcagttgcgaccaacacagctctatac
atactcctaacattctccatgtggttcatggtgggaacatggctgtttgcgccattcctg
ttcaatccatcagggtttgaatggcaaaagattgtggatgactgggatgattggtcaaag
tggatcggcagccgtggcggcattggtgtacccgctaacaaaagctgggagtcatggtgg
gatgaggagcaggaacacctccagtcaaccggcttcctcgggaggttctgggaaatctta
ctctccctccgattcttcctcttccagtatggtattatctaccacctccacatcgccaat
ggcagcaagagcattgtggtgtatggtctatcatggctggtcatagtggcggttgtgctg
gtgctaaaggtggtgtcgattggaaggaaaaagttcagtgccgacttccaactaatgttt
agacttctcaaactacttctgtttattggatttgtcggaactcttggcattctattcacc
cttctcaatctcacagttggtgacatctttgctgccttccttgccttcgcccccaccgga
tgggccctactatccgtgtcccaagcaatcaagccagcagtaaaggcgctaggtctgtgg
ggatcggtaaaggcacttgcgaggggatacgagtacataatggggctggttatctttaca
ccagttgccatcatggcatggttcccattcgtgtcggagttccagactagacttctattc
aaccaagctttcagtcgtggtctccaaatttctagaattcttgctggtggaaagaaacaa
aactaa
DBGET
integrated database retrieval system
