Carex rostrata (bottle sedge): 144560513
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Entry
144560513 CDS
T11623
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
Organism
crot Carex rostrata (bottle sedge)
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Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Zn_ribbon_3
HOCHOB
CIAPIN1
Motif
Other DBs
NCBI-GeneID:
144560513
NCBI-ProteinID:
XP_078165856
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Position
10:9995025..10002046
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AA seq
689 aa
AA seq
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MMDFGEEPDNWSNGNKRKKRYHRHTPRQIQLLESMFKECPHPDEKQRLHLSREVGLDPRQ
IKFWFQNRRTQMKTQHERADNCFLRAENDKIRCENIAMGEALKKVSCPHCGSPPIPDDSY
FDEQKLRMENTRLKEELDRVSSLTSNYMGRPMTQLPPTLSFSSLELTVGGLRNLSVGPSL
DLDLLTGGSSNMAFSFPTAISEMEKPIMAEMAAAAMDELVKIAQSEEPLWVNLGEGSEVL
SLDVYDNLFPKHGSQFRGPDVRIEASRDSGLVCMNATSLVDVFLDSSKWIEFFPTIVSKA
RTVDILADGLTGRSGSLHLMYEELHVLSPVAPTRELYFLRYCQQIEQGLWAIADVSVDLS
RDNQFATPSSTRRLPSGCLIQDIPNGYSKIIWVEHMEIEDRNLVHQLYRDLVISGVAFGA
HRWLVTLQRTCEWFSCLAAVANSPRDIRGVTPEGKRSMMKLSQKMVNNFCASLSASQMHR
WTAISGVNDDSVLVTVHRSCGPGQPSGVVLCAATSIWLPVSCERVFNFLKDERSQWDVLS
SGNPVHEVTSMACGSNAGNCISLLRGLNTSQNSMLILQETCTDASGSLVVYSPIEFNYIN
IVMSGEDPLNIPLQPSSGFTILPDVRVPGSTYGASTSSNLTGNTYGSLVTVAFQILVSSL
PSAKLNVESVSTVNSLINTTVQRIKAALT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatggatttcggcgaagaaccggataattggtcgaatggaaataagaggaaaaaacgt
tatcaccggcatactccccgtcaaattcagctactcgaatcgatgtttaaggaatgtccc
catccagacgagaaacagaggttgcatctcagcagagaagtgggtttggatcctcgccag
atcaagttctggttccaaaacagaagaacacagatgaagacacaacatgaaagagccgac
aactgcttccttcgagcagagaatgacaaaatccggtgcgaaaacattgccatgggcgag
gcattgaagaaagtatcatgtccccattgcggttctcctcccatccccgatgactcctac
tttgatgagcagaagctgcgaatggagaatacccgactgaaagaagagttggatagagtc
tctagcttgacatcaaactacatggggaggccaatgacgcaacttccaccgacattgtct
ttttcttcattggaactcacagtaggaggcctccggaacctatcagtgggtccatccctc
gaccttgatcttctcaccggaggttcatcaaatatggcattttctttccctacagccatt
tcagagatggagaagccgatcatggctgaaatggccgccgcggcaatggatgagcttgtc
aaaattgctcagagcgaagagcctttgtgggttaacttgggagaaggaagtgaagtcctt
agtctagatgtgtatgacaatctgttcccaaaacatggcagtcaatttcggggccccgat
gttcgaattgaggcctcgagagattctgggttggtctgtatgaatgccacttctttggtt
gatgtgttcttggattcaagcaagtggattgagttcttccctactatcgtctccaaggca
agaacggtagatatactcgctgacgggttgactgggaggagcgggtctttgcatttgatg
tatgaagagttgcatgtgctttccccagtagcgccaacaagggagttatatttcttgcgc
tattgccagcagatagagcagggtttgtgggcaatagctgatgtgtcagttgatttatcg
agagataaccagttcgcaaccccttccagcacaagacggcttccctcaggctgtctcatt
caagatattcccaatggctattccaagattatttgggtggagcacatggagattgaagac
agaaatctggttcatcaactataccgtgaccttgtcataagtggtgtggcatttggtgcg
caccggtggcttgtaacattacagagaacttgtgaatggttctcttgccttgcggctgtt
gcaaattcaccaagagacattaggggagtgactccagaaggtaagaggagcatgatgaag
ctgtcacaaaaaatggtgaacaatttttgtgccagtttgagtgcctcgcaaatgcacagg
tggacagccatatcgggtgtaaatgatgacagtgtactggttacagttcaccggagctgt
gggcccggtcaacccagcggtgtagttctttgtgccgccacctctatatggcttcccgtt
tcatgcgaaagggtcttcaatttcttaaaagacgagcgttctcagtgggatgttctttct
agcggcaacccggtgcatgaggtcactagcatggcatgtggatctaatgcaggaaactgc
atttctctccttcgtggtttgaatacaagtcagaacagcatgttaattctacaagagaca
tgcaccgatgcatcgggttcattagtagtttattcaccaattgaattcaattacatcaac
atcgtgatgagcggtgaggatccattgaacatcccgcttcaaccctcatcgggattcaca
attttgccagatgtgcgggtccctggatcaacctatggggcctcaacaagctcaaactta
acaggaaatacatatgggtctctagtaacggtggcgtttcagatattggtgagcagttta
ccatcagcaaagctgaatgtcgagtcggtatcgacagtgaactctctcataaacaccaca
gtgcaacggataaaggcagccttgacttga
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