Carex rostrata (bottle sedge): 144560779
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Entry
144560779 CDS
T11623
Symbol
LHCA1
Name
(RefSeq) chlorophyll a-b binding protein 6
KO
K08907
light-harvesting complex I chlorophyll a/b binding protein 1
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot00196
Photosynthesis - antenna proteins
crot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
144560779 (LHCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
crot00194
]
144560779 (LHCA1)
Photosynthesis proteins [BR:
crot00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCI
144560779 (LHCA1)
SSDB
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Paralog
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Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
144560779
NCBI-ProteinID:
XP_078166155
LinkDB
All DBs
Position
10:complement(11809012..11810976)
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AA seq
239 aa
AA seq
DB search
MASSLSTASFLGLQLAPKSRSGSRRMSWLTYATRARVTMSAEWMPGQPRPPYLDGSAPGD
FGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQ
ATYLGNPVPWGSLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLE
ELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVVIPRSLYP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctttgagcacggcctcatttttgggcctccagttggcccctaaatcgcgg
tctggatcgagacgcatgtcatggctgacatatgcgaccagagcacgcgtcacaatgtca
gctgagtggatgccgggccagccccgccccccttatctcgacggttcagcccccggggat
tttgggtttgatccattgggactcggtgaggtgccggagaacctcgagaggttcaaggaa
tctgaattgattcactgcagatgggccatgcttgccgtgcccgggattttggtaccggag
gcacttggtttgggcaactgggttaaggcgcaggagtgggccgccatcccaggaggtcag
gcaacgtacctgggaaacccggtaccatggggttccctgccaaccatcctagcgattgag
ttcctagcgattgcattcgtggagcaccaacgcagcatggagaaggaccccgagaagaag
aagtatccgggcggtgcctttgacccccttggctactccaaggaccccaaaaagctcgaa
gagctcaaggtcaaggagatcaagaacggtcggcttgctttactcgcctttgttggattc
tgtgtacaacaatcggcataccccggcacgggcccactggagaacctagcgacccacttg
gccgacccatggcacaacaacattggtgacgtcgtcattcccagatccctttatccttga
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