Carex rostrata (bottle sedge): 144562830
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Entry
144562830 CDS
T11623
Symbol
SYP71
Name
(RefSeq) syntaxin of plants 71
KO
K08506
syntaxin of plants SYP7
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
144562830 (SYP71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crot04131
]
144562830 (SYP71)
Membrane trafficking [BR:
crot04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
144562830 (SYP71)
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GFIT
Motif
Pfam:
SNARE
Ran-binding
DUF5089
XhlA
CCDC90-like
FliJ
TBCC_N
NPV_P10
Motif
Other DBs
NCBI-GeneID:
144562830
NCBI-ProteinID:
XP_078168254
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Position
12:complement(3411439..3414919)
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AA seq
266 aa
AA seq
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MSVIDILTRVDAICKKYDKYDVEKLNANNVSGDDQFARLFGSVEADIETALEKSELAANE
KNRATTVALNAEIRRIKARLMDEVPKLQRLALKKVKGLTKEDLATRNDLVAALPERIRSI
PDGTAQPKQSGGWFGSGSRPTNEIKFDSDGNFKSDYFQQTDESNQFRQEYEMRKMKQDQG
LDIISEGLDTLKNMASDMNEELDRQVPLMDEIDTKVDKATSDLKNTNVRLKETVNSLRSS
RNFCIDIILLCVILGIAAYLYNVLKK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatcgatatactgacacgtgtcgacgcgatatgcaagaagtatgacaagtat
gacgtggagaagctcaacgccaacaatgtctccggtgacgaccaattcgcgcgcctcttc
ggctccgtcgaggccgacattgagaccgctctcgagaaatcggaattggcggctaacgag
aagaatagagccaccactgtcgcattaaatgcagagatccggcgcatcaaggcgcggctc
atggatgaggtgcctaagcttcagcgattggcacttaaaaaggttaaaggcctgacaaaa
gaagatctggcaacaagaaacgaccttgttgcagcgctgccagagaggatccggtcaata
ccagatggtacagcccaaccaaaacagtcaggaggctggtttggttctggttcccgccca
accaatgagattaagtttgactcagatgggaatttcaagagtgactacttccagcaaact
gacgagtcaaatcaattccggcaagagtatgagatgcgcaagatgaaacaggaccaagga
ctagacattatttctgaaggccttgatactctcaaaaatatggcttctgatatgaatgag
gaattggatagacaagtccccctgatggatgagattgacactaaggtggacaaagcaacc
tctgacttgaaaaatacaaatgtcagactgaaggagactgtcaattcgctgagatcaagt
cggaatttttgtattgatattatcttgttgtgtgtaattctgggcattgctgcttacctc
tacaatgtattgaaaaaatga
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