Carex rostrata (bottle sedge): 144564855
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Entry
144564855 CDS
T11623
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
crot
Carex rostrata (bottle sedge)
Pathway
crot04120
Ubiquitin mediated proteolysis
crot04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
144564855
04120 Ubiquitin mediated proteolysis
144564855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crot03110
]
144564855
04131 Membrane trafficking [BR:
crot04131
]
144564855
04121 Ubiquitin system [BR:
crot04121
]
144564855
Enzymes [BR:
crot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
144564855
Chaperones and folding catalysts [BR:
crot03110
]
Other chaperones and cochaperones
Others
144564855
Membrane trafficking [BR:
crot04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
144564855
Ubiquitin system [BR:
crot04121
]
Ubiquitin ligases (E3)
U-box type E3
144564855
Multi subunit type E3
STUB1-CHIC2 complex
144564855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
CFAP70_TPR_C
ANAPC3
TPR_BSK1_C
TPR_12
CFAP70_mid_TPR
ARM_TT21_C
zf-NOSIP
TPR_CcmH_CycH
TPR_19
zf-Nse
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
144564855
NCBI-ProteinID:
XP_078170592
LinkDB
All DBs
Position
13:complement(11224785..11230060)
Genome browser
AA seq
273 aa
AA seq
DB search
MGKSEMDKQAQMRKEVGNAFFRKDKLGAAIDSYTEAIALQPNVAVYWTNRALCFRKKKEW
TRVEEDCKRALQLDRNSHKAHYMLGLVLLEKEDYTGAISEIGKAWDIMRSIAPHSEKADE
LWRVLAKAKFMEWELTSSEHHWRLQSLKEVCENALREYSFLHEESGDSTPNYLSGQLQLL
NEVFDKASKADVPTDVPDYLCCKITFDIFTDPVLTPSGITYERSALLEHLKTVGNFDPIT
RQPLKESQLIPNLAIKGAVQEFLKEHGWAYNMA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatcggagatggacaaacaagcgcagatgaggaaggaagttggaaatgcgttc
tttagaaaggacaaacttggggcagcaatcgattcgtacactgaggcaattgcgcttcag
cctaatgtcgctgtctactggacaaaccgagcattgtgctttagaaaaaagaaggaatgg
actagagtggaagaggattgcaaaagggcactccaacttgaccgtaattctcacaaggca
cactacatgctgggtcttgttttgcttgagaaggaagattatactggggctatctctgag
ataggaaaagcatgggatattatgaggagtatagccccacatagtgagaaggcagatgag
ttgtggagagttcttgcaaaagcaaagttcatggaatgggagctcacttctagtgagcat
cactggaggctccaaagcttgaaggaagtttgtgagaatgcacttagagagtacagtttc
cttcatgaagagtcaggtgacagtacccccaattatctgtcggggcaactccaactcttg
aatgaggtgttcgacaaagcatccaaggctgatgtgccaactgatgtcccagactacctc
tgttgcaagataacctttgacatattcactgatccagttctgactccgagtggtatcacc
tatgaaagatctgctctacttgagcatttaaaaacagtgggcaatttcgacccaataaca
agacagcctctcaaagagtcacaacttatcccgaatctggcaatcaagggagcagtgcag
gaatttttgaaagagcatggttgggcatacaatatggcctaa
DBGET
integrated database retrieval system
