KEGG   Carex rostrata (bottle sedge): 144566075
Entry
144566075         CDS       T11623                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    144566075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crot03019]
    144566075
   03016 Transfer RNA biogenesis [BR:crot03016]
    144566075
   03012 Translation factors [BR:crot03012]
    144566075
   04131 Membrane trafficking [BR:crot04131]
    144566075
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crot04147]
    144566075
Messenger RNA biogenesis [BR:crot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     144566075
Transfer RNA biogenesis [BR:crot03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    144566075
Translation factors [BR:crot03012]
 Eukaryotic type
  Elongation factors
   144566075
Membrane trafficking [BR:crot04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    144566075
Exosome [BR:crot04147]
 Exosomal proteins
  Proteins found in most exosomes
   144566075
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 FcpA Semialdhyde_dhC AAA_22 FlpD
Other DBs
NCBI-GeneID: 144566075
NCBI-ProteinID: XP_078172069
LinkDB
Position
15:complement(993906..996682)
AA seq 447 aa
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGIVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGHISNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDSGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKAVDKKDPTGAKVTKAAQKKK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggtaaggagaagtttcacatcaacatcgtggttattggccacgttgactctggaaag
tcgaccaccactggccacctcatctacaagcttggtggcattgacaagcgtgtgatcgag
cgttttgagaaggaagccgctgagatgaacaagaggtcattcaagtacgcctgggtgctt
gacaagctcaaggccgagcgcgagcgtggtatcaccatcgacattgccctctggaagttt
gagaccaccaagtactactgcacagtcatcgatgcccccggccaccgtgacttcatcaag
aacatgattactggtacctctcaggccgactgtgcagttctcatcatcgattccacgact
ggtggtttcgaagctggtatttccaaggatggccagacccgtgagcatgccctccttgct
tttactcttggtgtcaggcagatgatatgctgttgcaacaagatggatgccaccactccc
aagtactcaaaggccaggtatgatgaaattgtgaaagaagtgtcatcttaccttaagaag
gtcggctacaacccggacaaaatcccctttgtccccatctctggtttcgagggtgacaac
atgattgagcgctccaccaatcttgactggtacaagggtcccaccctcctggaggctctt
gacatgatcaacgagccaaagcgtccatctgacaagcccctccgtctccccctccaagat
gtctacaagattggaggcattggcactgtccctgttggtcgtgtcgagactggtgtcatc
aagcctggtatagttgtcacattcggcccaactggcttgaccactgaggttaagtcagtt
gagatgcaccacgaggctcttacggaggccttgcctggtgacaatgtcggtttcaacgtg
aagaacgttgctgttaaagatctcaagcgtggttatgttgcctccaactccaaggacgac
cctgccaagggggccgccagcttcacctcccaggtcatcataatgaatcaccctggccat
atcagcaatggctatgcccccgtcctcgactgccacacctcccacattgccgtgaagttt
tctgagatcctgaccaagatcgaccgtcgttctggtaaggagatcgagaaggagcccaag
tttttgaagaacggtgattccggtatggtcaagatgattcccaccaaacccatggtggtt
gagaccttctcggagtacccacctcttggtaggtttgctgtgagggacatgaggcagacg
gttgctgtcggtgtcatcaaggctgtcgacaagaaggatcctactggtgccaaggttacc
aaggctgcccagaagaagaaatga

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