Carex rostrata (bottle sedge): 144566075
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Entry
144566075 CDS
T11623
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
144566075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crot03019
]
144566075
03016 Transfer RNA biogenesis [BR:
crot03016
]
144566075
03012 Translation factors [BR:
crot03012
]
144566075
04131 Membrane trafficking [BR:
crot04131
]
144566075
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crot04147
]
144566075
Messenger RNA biogenesis [BR:
crot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
144566075
Transfer RNA biogenesis [BR:
crot03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
144566075
Translation factors [BR:
crot03012
]
Eukaryotic type
Elongation factors
144566075
Membrane trafficking [BR:
crot04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
144566075
Exosome [BR:
crot04147
]
Exosomal proteins
Proteins found in most exosomes
144566075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
Semialdhyde_dhC
AAA_22
FlpD
Motif
Other DBs
NCBI-GeneID:
144566075
NCBI-ProteinID:
XP_078172069
LinkDB
All DBs
Position
15:complement(993906..996682)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGIVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGHISNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDSGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKAVDKKDPTGAKVTKAAQKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtttcacatcaacatcgtggttattggccacgttgactctggaaag
tcgaccaccactggccacctcatctacaagcttggtggcattgacaagcgtgtgatcgag
cgttttgagaaggaagccgctgagatgaacaagaggtcattcaagtacgcctgggtgctt
gacaagctcaaggccgagcgcgagcgtggtatcaccatcgacattgccctctggaagttt
gagaccaccaagtactactgcacagtcatcgatgcccccggccaccgtgacttcatcaag
aacatgattactggtacctctcaggccgactgtgcagttctcatcatcgattccacgact
ggtggtttcgaagctggtatttccaaggatggccagacccgtgagcatgccctccttgct
tttactcttggtgtcaggcagatgatatgctgttgcaacaagatggatgccaccactccc
aagtactcaaaggccaggtatgatgaaattgtgaaagaagtgtcatcttaccttaagaag
gtcggctacaacccggacaaaatcccctttgtccccatctctggtttcgagggtgacaac
atgattgagcgctccaccaatcttgactggtacaagggtcccaccctcctggaggctctt
gacatgatcaacgagccaaagcgtccatctgacaagcccctccgtctccccctccaagat
gtctacaagattggaggcattggcactgtccctgttggtcgtgtcgagactggtgtcatc
aagcctggtatagttgtcacattcggcccaactggcttgaccactgaggttaagtcagtt
gagatgcaccacgaggctcttacggaggccttgcctggtgacaatgtcggtttcaacgtg
aagaacgttgctgttaaagatctcaagcgtggttatgttgcctccaactccaaggacgac
cctgccaagggggccgccagcttcacctcccaggtcatcataatgaatcaccctggccat
atcagcaatggctatgcccccgtcctcgactgccacacctcccacattgccgtgaagttt
tctgagatcctgaccaagatcgaccgtcgttctggtaaggagatcgagaaggagcccaag
tttttgaagaacggtgattccggtatggtcaagatgattcccaccaaacccatggtggtt
gagaccttctcggagtacccacctcttggtaggtttgctgtgagggacatgaggcagacg
gttgctgtcggtgtcatcaaggctgtcgacaagaaggatcctactggtgccaaggttacc
aaggctgcccagaagaagaaatga
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