Carex rostrata (bottle sedge): 144566177
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Entry
144566177 CDS
T11623
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crot03019
]
144566177
03041 Spliceosome [BR:
crot03041
]
144566177
Messenger RNA biogenesis [BR:
crot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
144566177
Spliceosome [BR:
crot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
144566177
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Paralog
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Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
144566177
NCBI-ProteinID:
XP_078172223
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All DBs
Position
15:complement(8262965..8266869)
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AA seq
435 aa
AA seq
DB search
MQQQQRLKQQQNAALMQQAMLLQQQQQSLYPHHPGLLAAPQIEPILSGNLPPGFDPSTCR
SVYVGNVHLQVTEALLQEVFQSVGPVEGCKLIRKEKSSFGFVDYYDRRSAALAIVTLNGR
QLFGQPIKVNWAYASGQREDTSAGHFNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWD
QKTGRSRGFGFVSFRTQQDAQSAINDLNGKWLGSRQIRCNWATKGANNGDEKQSSDSKSV
VELTAGTSGVHEPGFEGTQEATNEEAPENNPQYTTVYVGNLAHEVTQVDLHRLFHTLNAG
VIEDVRTQRDKGFGFVRYSSHAEAALAIQMGNGQILCGKPIKCSWGSKPTPPGTASTPLP
PPVPAAQFPAGGLSATDLLAYERSLAISKMQASNQALMGQHALKQAAMGMGAGASQAIYD
GGFQNVTAAQQLMYY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaacaaaggctgaagcaacaacaaaacgctgccctgatgcaacaagctatg
ctccttcagcaacagcaacagtcgttgtaccctcaccaccctggtctcctggccgctcct
cagatagagccaatactaagtggaaatctgcctccgggttttgatccaagtacttgccgc
agtgtgtatgttgggaatgttcatcttcaagtaactgaagctctattgcaagaggtcttt
cagagtgttggccctgtcgaaggatgtaaacttatcaggaaggaaaagtcgtcatttgga
tttgttgactattatgatcgtagatcagctgcacttgcaattgtgactctcaatggccga
cagctgtttggacaacctatcaaggttaactgggcttacgctagtggtcagagggaagac
acctcagcaggacacttcaatatttttgtcggcgatctcagcccagaggtcactgatgcc
accctttttgcatgcttctcggtttacaccagctgctcggatgctagagttatgtgggac
cagaagactgggcgttctcgaggatttggttttgtttccttcaggactcaacaggatgct
caaagcgccattaatgacttgaatggtaagtggcttggtagccgccagatccgttgcaac
tgggcaacaaagggtgcaaataatggtgacgagaaacaaagctctgattcaaagagcgtt
gttgaactgacagccgggacatcaggtgtgcatgagcctggatttgaaggcactcaggag
gccaccaatgaggaagctccagagaacaatccccagtacacaactgtttatgtgggcaat
ctcgcccatgaggtcacacaagtagatctccaccgcctatttcacacactgaatgctgga
gtgatagaagatgtgcgtacccagcgtgataagggatttggatttgtgaggtacagtagc
catgctgaagctgcccttgccatccaaatgggcaatggccagattctttgtggaaagccg
attaagtgttcctggggaagcaagccgacacctcctggcacagcttcaaccccactccca
cctccagtcccagcagcccaattcccagctggcggcctctctgcaactgacctcctagcc
tacgagcggtccctggcaatatcaaagatgcaagcctcaaaccaggccctgatgggacag
catgctctgaagcaagctgctatgggcatgggtgctggtgccagccaggccatttatgac
ggtggattccagaatgtcacagcggctcagcagcttatgtattactaa
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