Carex rostrata (bottle sedge): 144569259
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Entry
144569259 CDS
T11623
Symbol
PEX6
Name
(RefSeq) peroxin 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
crot
Carex rostrata (bottle sedge)
Pathway
crot04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
144569259 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crot04131
]
144569259 (PEX6)
Membrane trafficking [BR:
crot04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
144569259 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
Rad17
AAA_lid_3
RuvB_N
AAA_14
RNA_helicase
AAA_28
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_17
AAA_7
AAA_18
TsaE
ATPase_2
Parvo_NS1
AAA_33
PEX6_4th
Mg_chelatase
nSTAND_NTPase5
AAA_25
IstB_IS21
ATPase
TIP49
AAA_24
AAA_2
PhoH
MCM
Motif
Other DBs
NCBI-GeneID:
144569259
NCBI-ProteinID:
XP_078175651
LinkDB
All DBs
Position
18:complement(1182509..1190246)
Genome browser
AA seq
935 aa
AA seq
DB search
MVEMRRKPLILASTRAILDSVLSPSESLDETELDDSAQNRRCLEICESIKLTAGVLRFDE
ITDASCSDEFSELSSFVCASTSVLRQLETVTGSLVLIKNTETNVGRIAKIIILDPTGQNA
EELDSTLDPPSHRVMGVLPSHTYPKKNNFILNNAEEVGFISPLLAFNLGLHTSCLKLLLT
EEDNLFKYFESNGEAIEGESMTQNNLSLKIEVAPWPNLPKYASHLRVSFVKIPECGMLAS
LKGNSPIEMSDYQNMIDSALNEFFKVDRLLTKGDVFCVRKIWSCGSEMCIVCSGKSAKGR
ANDLIYFKVTSMEPSDEPVLRANSSQTALVLGGAAPSAILPYNLLHSSLDQIPLQGETVK
TLSSVIAPAICSSDLSSRFRVALFLYGPSGCGKRTVVRYIAQHTGLHVVEYSCHDMLTSS
EKGASVALAAAFKAAHRFSPCIMLLRHFEAFANLSSNEGPQSDQAGVTMEISSIIREYTE
PLSRDDELHTNGTVNAELFLVQPEHSSQHQVILVASADTAEGLHPAIRRCFSHEISMESL
TEEKRSTMITQKLTAFIKITNQRINPELIKEATAQTSGFMPRDIDALFADVAANFVHEAF
INNEKSSENEAIGSDKEDSLSKEDFLKALERSKKRNASALGAPKVPNVKWEDVGGLEDVK
KSILDTVQLPLMHKHLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL
INMYIGESEKNVRDIFQKARTARPCVIFFDELDSLAPARGAAGDSGGVMDRVVSQMLAEI
DGLNDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNTDPSYRERVLQALTRKFKL
HEDVSLFEVAKRCPPNFTGADMYALCADAWFHAAKRKVSEQNMDSPACKDENDLVVVGFD
DFVKVLTEISPSLSLSEIAKYERLREKFEGPSKRV
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggtagagatgcgtcgcaagccattgatacttgcttcgacaagagctattctagattcg
gttcttagtccctccgaatcgctagatgaaactgagcttgacgattcagctcagaaccga
cggtgccttgagatctgcgagtccatcaaattgacggctggggttctccggtttgatgag
ataacagatgcttcgtgcagtgatgaatttagcgagctctcttcttttgtttgtgcctcc
acgtctgtacttaggcaattggagactgttactggttccctggttctcattaaaaatacc
gagactaatgttggaagaatagctaagatcataatcctggatccaacgggccaaaatgca
gaagagcttgattcaaccttagacccaccttctcaccgtgtaatgggtgtactaccttct
cacacataccccaaaaaaaacaacttcatcttgaataatgctgaagaagttggttttatt
agccccttattggcttttaatcttgggctgcatacatcatgcctcaagcttctacttact
gaagaagataacttattcaaatattttgaaagcaacggagaggcaatagagggagaaagt
atgactcaaaataatttatcactaaaaatagaggttgctccttggccaaatttaccgaaa
tatgcctctcacttgagagtatcttttgttaaaattccggaatgtggtatgctagcatct
cttaagggaaactcaccaattgagatgagtgactatcagaacatgatcgattcagcacta
aatgagtttttcaaggtcgaccggcttctgacaaaaggggatgttttttgtgtgcgtaaa
atctggagttgcggatccgaaatgtgtatcgtttgtagtggcaagagtgcaaaagggaga
gcaaatgatttaatctattttaaggtaacctcaatggagccatctgatgagccagttctt
cgggcgaactctagtcaaacggcacttgtgctgggtggagctgccccatctgcgatcctt
ccatacaatttattacacagttcattggatcagattcctttgcagggtgaaacagtcaag
actttgtcatctgttattgcaccagcaatatgttcctctgatctgtcctccagatttcga
gttgctcttttcttgtatggaccttcaggatgtggcaaaaggacagttgtgaggtacatt
gctcagcacactggccttcatgttgtggagtacagttgtcatgatatgctaacctcctca
gaaaaaggcgcatcggttgcacttgctgctgcttttaaagctgctcatagattttcgcct
tgtataatgctacttagacacttcgaggcatttgctaatctctcttcaaatgagggccca
cagtcagaccaagctggagtcacaatggagatctcatcaatcatcagggagtacaccgaa
ccactctcaagggatgacgaattacatacaaatggaactgtaaatgcagaactttttcta
gttcaaccagagcattcaagccaacaccaagtaatcctagttgcctctgctgatactgca
gaaggtctgcatcccgcaataaggcggtgttttagccatgagatcagcatggaatcttta
actgaagaaaaaaggtctactatgattacgcaaaagcttaccgcatttataaagataacc
aatcagcgtatcaatccagagctgataaaagaagcaactgcacagacttcaggcttcatg
cctagagacatagatgcattatttgcagatgttgcagctaattttgtgcatgaagctttt
ataaataacgagaaaagctctgagaatgaagccattggttcagataaagaggattctttg
agtaaggaagattttttgaaagctcttgaaaggtcaaagaaaagaaacgcttctgcacta
ggtgcaccaaaagtgcctaatgttaaatgggaagatgttggtggtcttgaggatgtgaag
aagtcaattttggacacagttcagttaccactcatgcacaagcatctgttctcatctgga
ttgaggaagcgatcgggagtcctgctttatgggcccccgggtactggcaagactttattg
gcgaaagctgttgcaactgagtgctccttgaactttctaagcgtaaaggggccggagttg
attaatatgtacataggagaatcagaaaagaatgtcagagatattttccagaaggcaagg
acagcacgtccatgtgtcattttctttgatgaattggattcactagcgccagctcgaggt
gctgctggtgattctggtggagtcatggatagagttgtttctcagatgcttgcagaaatt
gatggtctgaatgactctagtcaggatctgtttataatcggggcaagcaataggccggac
ctgatagacccggctcttctccgccctggtcgctttgacaaacttctttacgtgggagtt
aacactgatccatcttatcgtgagagggttctacaagcactcacacgaaaattcaaatta
cacgaagatgtatctctttttgaagtagcaaagagatgccctccaaattttactggtgct
gatatgtatgcattatgtgctgatgcttggtttcatgctgccaagcggaaggtctctgaa
caaaacatggactctccggcttgtaaagatgaaaatgatttggtggtggttggatttgat
gattttgtgaaggtgttgactgagatatcaccatctctctctttgtcggagattgcaaaa
tatgaacgcctaagagaaaagtttgaaggcccctccaaaagagtctag
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