Carex rostrata (bottle sedge): 144571278
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Entry
144571278 CDS
T11623
Name
(RefSeq) ABC transporter G family member 39
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
144571278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crot02000
]
144571278
Transporters [BR:
crot02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
144571278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA
AAA_22
nSTAND3
RsgA_GTPase
NTPase_1
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
144571278
NCBI-ProteinID:
XP_078176637
LinkDB
All DBs
Position
19:1350600..1359937
Genome browser
AA seq
1444 aa
AA seq
DB search
MMEIGRVGSLAGSMRDSVSRSMSSWRGGSSGSNIFGRSVREEDDEEALKWAAIEKLPTYD
RMRKGMLLTDDNGVPHEVDIDGLSMQERKTLLERLIRTAEEDNERFLLKLRNRMERVGID
NPTIEVRFENLNIDAEAYVGNRGIPTFTNFFTNTVMDVLSYLRIVPSGKKPISILNDISG
VIKPCRMTLLLGPPASGKTTLLLALAGKLDSELKVSGRVTYNGHDMDEFVPQRTSAYIGQ
NDLHIGEMTVRETLTFSARCQGVGTRYDMLTELSRREKEAKIIPDPDIDVYMKAISVEGQ
EIVITDYILKILGLDICADTMVGDSMIRGISGGQKKRVTTGEMLVGPAKALFMDEISTGL
DSSTTYQIVNSLRQSVHILGGTAVIALLQPAPETYDLFDDILLLSEGKIVYQGPREHVLE
FFESMGFKCPERKGVADFLQEVTSRKDQHQYWAHRDVPYRYISVNEFSEAYKSFHIGRKL
GQEMSAPFDRSRNHPAALTTSKYGISMMELLKVNIDREWLLMKRNSFVYIFKVVQLIILG
SIAMTVFLRTKMPRNTVEDGVIFLGAMFLGLVTHLFNGFAELAMSIAKLPIFYKQRDLLF
YPSWIYALPTWILKIPISFLECAVWIGLTYYVIGFDPDIERFFRHYLLLVLISQMASGLF
RLLAAVGREMVVADTFGSFAQLILLILGGFLISRENIKKWWIWGYWSSPLMYAQNAIAVN
EFLGHSWNKMVNLTEGVGVERLGTQVLQVRGIFVDANWYWIGVGALLGYIFLFNILFVFF
LDWLGPLNKGHTVISEEALKEKQANRTGQVVELRQLLDESSKGRNDEVIELQNKKKGMVL
PFAPLSITFDDIRYSVDMPQEMKDKGITDDRLLLLKGVSGAFRPGVLTALMGVSGAGKTT
LMDVLAGRKTGGYIEGDICISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLR
LPHEVDSEARKMFIEEVMELVELTSLRGALVGLPGVNGLSTEQRKRLTIAVELVANPSII
FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIY
VGPLGRNSCDLINYFESVDGVKKIKAGYNPATWMLEVSTLAQEDILGINFAEIYKNSDLY
RRNKALISDLSTPPAGSKDLFFPTTYSQSFLTQCMACLWKQHKSYWRNPSYTATRIFFTT
VIAFIFGTIFWRLGKKVTTQQDLLNSLGCMYASVLFIGIQNGQTVQPIVDVERTVFYREK
AAGMYSALPYAFAQVLIEIPHIFLQTIIYGLIVYSLIDFDWTVAKFLWYLFFMYFTFMYF
TFYGMMAVAMTPNSDIAAIVSTAFYAIWNIFAGFLVPRPRIPVWWRWYTWACPVAWTLYG
LVASQYGDIPTMMVEGERVQDFVRRFYGFRHDFLGYVAAAVVGFALLFAFVFAFAIKNLN
FQRR
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgatggagatcggcagggtaggcagcctcgccggcagcatgcgagacagtgtatcacga
agcatgtcatcgtggcgtggcgggtcaagtgggagtaacatatttggtcggtcggtcaga
gaggaggatgatgaggaggcactgaaatgggccgctatagagaagctcccgacatatgat
aggatgaggaaaggtatgcttctgactgatgacaacggagtgccccatgaggtcgacata
gatggactcagcatgcaagagaggaaaacccttttagaaaggctgataaggacagcagag
gaggataacgagaggttccttttgaagctgcggaaccgtatggaacgtgttgggattgat
aacccaacaattgaggtgcgttttgagaatctaaacatagatgctgaggcttatgtcggc
aatcgtggaattccaaccttcacaaatttcttcaccaacactgtgatggatgtgttgagc
tacctccgtatagttccgagcggtaagaagccgatctcgattctcaatgacataagtgga
gttattaaaccttgcaggatgactctgcttttaggaccccctgcatcggggaaaactacc
ttactgctagctctggctggaaagcttgattcagaacttaaggtgtcgggaagagttaca
tacaatggccacgacatggatgagtttgtaccgcagagaacctcagcttatatcggccag
aatgatcttcatattggagaaatgacagttagagaaaccttgactttttcagcacggtgc
caaggagttgggacccgttatgatatgttgactgagctttcaagaagagaaaaggaagca
aagattataccagatccggatattgatgtgtacatgaaggcgatatctgtggaaggccag
gaaattgttatcaccgattacatccttaagattttgggtctggatatctgtgccgataca
atggtaggcgactcgatgattcggggcatttccggcggacagaagaaacgtgtcacaaca
ggtgaaatgcttgtggggccagctaaggcacttttcatggacgaaatatcaactgggctt
gacagctccaccacgtaccagattgtgaactctctgaggcaatcggtacacattctcggg
ggtacagcagtcattgcactgcttcaaccagcaccagagacatatgacctctttgatgac
attttgcttttgtctgaggggaaaattgtgtatcaaggcccacgtgagcatgttctagag
ttctttgagtcgatggggtttaaatgtcctgaaagaaaaggtgttgctgattttttgcaa
gaagttacatcaaggaaagaccaacatcagtattgggcccacagggacgtaccataccgg
tatatttctgtgaatgaattttctgaagcctacaaatcattccacattggccgtaaattg
ggacaggagatgagtgcaccatttgataggagcaggaaccatcctgcagctctcaccaca
tcaaagtatggtattagcatgatggagctattgaaagttaacatcgatagagaatggctc
ctaatgaagagaaactcttttgtctatatcttcaaagtagtccaacttataattctcggt
tcaattgccatgaccgtgttcctgcgcacaaaaatgccccgaaacacagtagaggatggc
gtgatcttcttgggtgccatgttccttggacttgttacacatttattcaatggattcgcg
gaactcgccatgagcattgcaaagctgcccattttttacaagcaaagagacctcctcttc
tatccctcatggatatatgcgcttccaacatggatccttaagatacctatttcgttcctt
gaatgtgcagtttggatcggtttaacatattatgtgattgggtttgatccagatattgaa
agatttttcaggcattatttattacttgtgttgataagtcagatggcatctggtctcttt
cgacttcttgctgctgtaggtagagagatggttgtggctgatacctttggttcttttgca
caattaattctcctaatcctcggtggtttcttgatatcacgagaaaatataaaaaaatgg
tggatttggggatactggtcatctccattgatgtacgcacaaaatgctattgctgtcaac
gagttccttgggcatagctggaacaagatggttaatttaacagaaggtgtcggtgttgag
agacttggtacacaagttttacaagtgcgtggaatctttgtggatgccaactggtactgg
attggagttggtgcattgcttggatacattttcctgttcaacattctctttgtcttcttc
cttgactggcttggcccacttaacaaaggccatactgtaatatccgaggaggcactcaag
gagaagcaagcaaaccgtactggtcaagttgttgagcttcgccaactcctagatgaatct
tcaaaagggagaaatgatgaagttattgaattacaaaacaagaaaaaggggatggtactg
ccttttgcacctttatcgatcaccttcgatgacatcagatactctgtagatatgcctcag
gaaatgaaagacaaaggcataactgatgaccgactactgcttctaaaaggtgtaagtggt
gcgtttagacctggtgttcttaccgcattgatgggtgtaagtggagcaggaaagactaca
ttaatggatgtgctagctgggaggaaaactggaggatacatagagggagatatttgcatt
tcaggttacccgaaaaagcaagagacatttgcacgcatttctggttactgcgagcagaat
gatatccactcaccgcatgtcacagtctatgagtcactcctgtactccgcttggcttcgg
ctgccccatgaagtagactctgaagcaagaaagatgttcattgaggaggtaatggagttg
gtggagcttacatctctaaggggagcgcttgttggtttaccgggtgtaaacgggctatct
actgagcagaggaagaggttgacgatagctgttgagttggtcgctaacccatctatcata
ttcatggacgagccaacatctggcctggatgcaagagctgcagctatagtaatgaggaca
gtgcgaaatacagttgatacgggacggacagttgtttgtaccattcatcagcctagtatt
gacatatttgaagcattcgatgagctttttctcatgaaaagaggtggtgaggaaatttat
gtcggtccattggggcgtaactcatgcgatctcattaattactttgagagtgttgatgga
gttaagaagataaaagctggttataacccggcaacatggatgttagaggtgagcactttg
gcccaagaagacattctaggaatcaactttgcagaaatttacaagaactcagatctctat
cggagaaacaaagctttgataagtgatttgagcacgcctccagcaggatcaaaagaccta
ttcttcccaactacatattctcaatcattccttacacaatgcatggcttgcctgtggaag
cagcacaaatcgtactggcgcaacccatcatacactgccactcggattttcttcacgact
gtcattgcatttatttttggtaccatcttttggagactcggcaagaaagttactacacaa
caagatttgctcaactcactggggtgtatgtatgcctctgtgcttttcattggtatacaa
aatgggcaaacagtacagcctattgtagacgtagagcgtactgtattctacagagagaaa
gctgctgggatgtactcggctctaccttatgcgtttgcacaggttttgatcgaaatacca
cacatattccttcaaactattatatatggcctcattgtgtatagtctaattgactttgac
tggacggttgcgaagttcttgtggtatcttttcttcatgtacttcacattcatgtacttc
acattttacgggatgatggctgttgcaatgacaccgaatagtgatattgctgcaatcgtc
tctacggctttctacgctatatggaatatctttgcaggctttttggttccacggccgagg
atcccagtatggtggagatggtacacttgggcctgcccagtcgcatggacactctacggg
cttgtggcttcgcaatatggagacattcctactatgatggttgaaggtgaacgggtgcaa
gactttgtcaggcggttctacgggtttaggcatgatttcttgggttatgtggctgcggct
gtggttggtttcgcattattatttgcttttgtgtttgcctttgcgatcaagaaccttaat
ttccagagaagataa
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integrated database retrieval system
