Carex rostrata (bottle sedge): 144572012
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Entry
144572012 CDS
T11623
Symbol
OVA9
Name
(RefSeq) glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot00970
Aminoacyl-tRNA biosynthesis
crot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
144572012 (OVA9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crot01007
]
144572012 (OVA9)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crot03016
]
144572012 (OVA9)
Enzymes [BR:
crot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
144572012 (OVA9)
Amino acid related enzymes [BR:
crot01007
]
Aminoacyl-tRNA synthetase
Class I (A)
144572012 (OVA9)
Transfer RNA biogenesis [BR:
crot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
144572012 (OVA9)
Prokaryotic type
Other AARSs
144572012 (OVA9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C2
tRNA-synt_1c_C
tRNA_synt_1c_R2
AvrRxo1-ORF2
Motif
Other DBs
NCBI-GeneID:
144572012
NCBI-ProteinID:
XP_078177532
LinkDB
All DBs
Position
19:complement(1927604..1938581)
Genome browser
AA seq
788 aa
AA seq
DB search
MGLGRPEAPPLEQFLAIGLDKRTAQNAVANKKVTSNLLAVIKEAGVEMCDKAIGNLLYTV
ATKYPANALVHRPMLVQYVVSTKIRSSAQLDAALSFLTNAGPEPFDLDKFEQACGIGVEV
SLEEIQASVKAIVDENMDAILEQRYHINVGSLCGQVRKLQPWGDAKIVKEELDNKLFEVL
GEKTEADEKKPMKKKKEKPAKTEVQTTVTTPPPSEEELNPYTIFPKPEDNYKVHTEIFYS
DGSIWRCHNTKELLDKHLKATEGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDRGGSCY
LRFDDTNPEAEKTEYIDHIKEIVNWMGWEPFKITYTSDYFQDLYDLAVELIKKGLAYVDH
QTPEEVKEYREKMMNSPWRDRPINESLKLFDDMRRGLIDEGKATLRMKQDMQSDNKNMND
LIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFEIRRPSYYWLLVAL
GLYQPYVWEYSRLNISNTVMSKRKLNRLVTDKWVDGWDDPRLLTLAGLRRRGVSSTAINS
FVRGIGITRSDNSLIRVDRLEYHIREELNKTAPRSLVVLNPVKVMIMNLEDDKVMDLDAK
MWPDAPADDAASYYKVPFSRVVYIDRSDFRLRDSKDFYGLAPGKTVLLRYAFPIKCIAVV
TGDDPEDIIEIRAEYDPLKSTKPKGVLHWVAEPSPGVEPLKVEVRLFDKLFLSENPGELE
DWLSDLNPNSKEVIQGCYAVPSLAKAVLGDKFQFERLGYFAVDTDSIPDKLVFNRTVTLR
DSYSKGGK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggggttgggccggccagaagcgcctccgctcgagcaattcctggccattggattggac
aagcgcacggcgcagaatgcggtcgccaacaaaaaagtcacgtctaacctcctagccgtc
atcaaagaggctggtgtagagatgtgtgacaaggcaattggaaacctcctttacacggtg
gcgaccaagtatccagcaaatgcattggttcacagacctatgcttgttcagtatgtagtc
tcgacaaagattaggagttcggcacaactagatgctgcactctcttttcttactaatgcg
gggccggagccttttgatctggataaatttgaacaagcctgtggaataggagttgaagtt
tctctggaagaaatccaagcatctgtcaaggcaattgtagatgagaacatggatgccata
ttggagcaacgttaccatataaatgttggaagcttgtgtgggcaagtgagaaagctccaa
ccttggggtgatgctaaaattgtgaaggaagaattagataacaaactttttgaagtactt
ggagaaaagacagaggctgatgaaaagaaacccatgaagaagaagaaagaaaagcctgct
aaaactgaggtgcaaactactgtcactactcctccaccttctgaggaggaactgaatcct
tataccatctttccaaaaccagaggataattataaggtgcatacagaaatattctatagt
gatggttcaatttggaggtgccacaacacaaaggaactgttggataagcatctgaaagct
accgaaggaaaagtgctcactcgattccctcctgaacctaatgggtatttacatatcggc
catgctaaggctatgttcattgattttgggctggcaaaggataggggtggttcatgctat
ctaaggtttgatgacacaaaccccgaggctgagaaaacagagtacatagatcatatcaag
gaaatagtcaattggatgggttgggagccgttcaagattacatatacgagtgattatttt
caagacttgtatgacctagctgttgagttgataaagaaaggattagcttatgttgatcat
cagaccccagaagaagtaaaggagtacagagagaagatgatgaatagcccatggagagat
aggccgataaatgaatcacttaaattatttgatgacatgagaaggggcctaatagatgaa
ggaaaggccacacttcgcatgaagcaggatatgcagagtgacaacaaaaacatgaatgac
ctgattgcatatcgtataaagtttactcctcatccacatgctggggacaaatggtgcata
tatccaagttatgattatgctcattgcattgttgattcacttgaaaacatcactcattca
ctttgtactcttgaatttgagataagacgtccctcgtactactggttattggtagcactc
ggcctctatcagccatatgtatgggaatattctcggctaaatatctcaaacactgtcatg
tctaaaagaaagttgaatcggttagtgacagataaatgggtcgatggctgggatgatcct
cggttgttgactctagcgggcttgcgtcggagaggcgtatcttccaccgccatcaattct
ttcgttcgtgggattggcatcactagaagtgataacagtctgatacgtgttgatcgcctt
gagtaccatattcgggaggagctgaacaaaactgcacctcgttccttggtggtgttgaac
ccagtcaaggttatgattatgaatcttgaagatgataaggtgatggatcttgatgcaaag
atgtggcctgatgcacctgcagacgatgctgcctcatattacaaggttcctttttcaagg
gttgtgtacattgatagatctgatttccgcttgagagattcaaaggacttttatggtctc
gctcccggtaaaactgtgcttctcagatatgccttcccaataaaatgcattgcagttgta
actggtgacgatcctgaagatattatagaaatacgtgctgaatatgatcctttgaaaagc
actaaacccaagggagttcttcactgggttgctgagccatcaccgggggtagaacccctc
aaggttgaagtcagattatttgacaagctattcctttctgagaatccaggcgagctggag
gattggctgtcagatctaaatccaaattcaaaggaagtgatacaggggtgttatgctgtg
ccatcccttgccaaggctgttttgggcgacaaattccaatttgaaaggctaggttatttt
gcggtcgatacagattcaattcctgacaagcttgtgtttaaccgcactgttactctccgt
gattcttactccaaggggggtaaatag
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