Carex rostrata (bottle sedge): 144572212
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Entry
144572212 CDS
T11623
Symbol
SYP32
Name
(RefSeq) syntaxin of plants 32 isoform X1
KO
K08490
syntaxin 5
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
144572212 (SYP32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crot04131
]
144572212 (SYP32)
Membrane trafficking [BR:
crot04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
144572212 (SYP32)
SSDB
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Paralog
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Motif
Pfam:
SNARE
Syntaxin-5_N
ISG65-75
BOS1_GOSR2_MEM11-like_N
Prominin
ArAE_1_C
Sec10_N
Motif
Other DBs
NCBI-GeneID:
144572212
NCBI-ProteinID:
XP_078177802
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Position
20:complement(3422942..3426950)
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AA seq
351 aa
AA seq
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MATRAAHSSYRDRTNEFRSAVEGARKQFNVGAASSSGSGSGSILEGTKAVASIQSEFNRR
ASKIGLGIHQTSEKLARLAKLAKRTSVFDDPTKDIQDLTAIIKKDIGALSTAVADLQHLC
DSQNESGNISRDTTSHSSTVIDNLKNRLMSTTNEFKDVLTMRTENMKVHEDRRKLFSATA
GKEPANPFIRQRPIVSRGNSSDSAAPPAPWATDSSASAPLFPRSTLTNRKKGNGEASSST
QPLMVQQQQQQQQLAVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGEIAIRI
DENMEDTLANVEGAQGQLLKYLNSISSNRWLMIKIFFVLMVFLMIFLFFVA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggccactcgagcggcacattcttcgtacagagatcgcaccaacgagttcagatcggcg
gttgagggcgccagaaagcagtttaatgttggcgcagctagcagcagcggcagcggcagc
ggatccatactggaggggacgaaggctgtggcgtcgattcagtctgagtttaacagacga
gcttctaagatcggccttgggattcaccagacctctgagaaattagccaggctagccaaa
ttggccaagagaacatcagtgtttgacgacccaacaaaagacattcaagacctgacggct
ataataaaaaaggatattggggctctaagtactgcagttgccgatcttcagcacttatgt
gattcacaaaatgagagtggtaacatctcgagagacaccaccagccactctagtactgtc
attgataatctgaaaaaccgcctcatgagcacgacaaacgagttcaaggatgttctcacc
atgaggacagagaacatgaaagtgcacgaggataggagaaagctgttctctgccacagct
ggaaaggaaccggcgaatccttttataaggcagcgacctattgtgtctagaggcaattct
tctgactctgctgcccctcctgccccatgggcaactgattcatctgcctctgctcctctg
tttcccaggtctacattgactaataggaaaaaggggaatggggaggcttcatcatcgact
caaccgctgatggtgcagcagcagcagcaacagcaacaattggcggtgcagcaagacagt
tacatgcagagcagagcagaggctctccaaaatgtcgaatcgaccattcatgaactgagc
aacatcttcacccagctcgccaccatggtttcccaacagggagagatcgccatcagaatt
gatgagaacatggaagacacattggcgaatgtggaaggagcacaaggtcagctgcttaag
tacctaaatagtatttcatcgaacaggtggctcatgatcaagattttctttgtcctcatg
gtcttcctcatgattttcctcttctttgttgcataa
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integrated database retrieval system