KEGG   Carex rostrata (bottle sedge): 144572212
Entry
144572212         CDS       T11623                                 
Symbol
SYP32
Name
(RefSeq) syntaxin of plants 32 isoform X1
  KO
K08490  syntaxin 5
Organism
crot  Carex rostrata (bottle sedge)
Pathway
crot04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:crot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    144572212 (SYP32)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crot04131]
    144572212 (SYP32)
Membrane trafficking [BR:crot04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    144572212 (SYP32)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N ISG65-75 BOS1_GOSR2_MEM11-like_N Prominin ArAE_1_C Sec10_N
Other DBs
NCBI-GeneID: 144572212
NCBI-ProteinID: XP_078177802
LinkDB
Position
20:complement(3422942..3426950)
AA seq 351 aa
MATRAAHSSYRDRTNEFRSAVEGARKQFNVGAASSSGSGSGSILEGTKAVASIQSEFNRR
ASKIGLGIHQTSEKLARLAKLAKRTSVFDDPTKDIQDLTAIIKKDIGALSTAVADLQHLC
DSQNESGNISRDTTSHSSTVIDNLKNRLMSTTNEFKDVLTMRTENMKVHEDRRKLFSATA
GKEPANPFIRQRPIVSRGNSSDSAAPPAPWATDSSASAPLFPRSTLTNRKKGNGEASSST
QPLMVQQQQQQQQLAVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGEIAIRI
DENMEDTLANVEGAQGQLLKYLNSISSNRWLMIKIFFVLMVFLMIFLFFVA
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggccactcgagcggcacattcttcgtacagagatcgcaccaacgagttcagatcggcg
gttgagggcgccagaaagcagtttaatgttggcgcagctagcagcagcggcagcggcagc
ggatccatactggaggggacgaaggctgtggcgtcgattcagtctgagtttaacagacga
gcttctaagatcggccttgggattcaccagacctctgagaaattagccaggctagccaaa
ttggccaagagaacatcagtgtttgacgacccaacaaaagacattcaagacctgacggct
ataataaaaaaggatattggggctctaagtactgcagttgccgatcttcagcacttatgt
gattcacaaaatgagagtggtaacatctcgagagacaccaccagccactctagtactgtc
attgataatctgaaaaaccgcctcatgagcacgacaaacgagttcaaggatgttctcacc
atgaggacagagaacatgaaagtgcacgaggataggagaaagctgttctctgccacagct
ggaaaggaaccggcgaatccttttataaggcagcgacctattgtgtctagaggcaattct
tctgactctgctgcccctcctgccccatgggcaactgattcatctgcctctgctcctctg
tttcccaggtctacattgactaataggaaaaaggggaatggggaggcttcatcatcgact
caaccgctgatggtgcagcagcagcagcaacagcaacaattggcggtgcagcaagacagt
tacatgcagagcagagcagaggctctccaaaatgtcgaatcgaccattcatgaactgagc
aacatcttcacccagctcgccaccatggtttcccaacagggagagatcgccatcagaatt
gatgagaacatggaagacacattggcgaatgtggaaggagcacaaggtcagctgcttaag
tacctaaatagtatttcatcgaacaggtggctcatgatcaagattttctttgtcctcatg
gtcttcctcatgattttcctcttctttgttgcataa

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