Carex rostrata (bottle sedge): 144573712
Help
Entry
144573712 CDS
T11623
Symbol
RIBA3
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
crot Carex rostrata (bottle sedge)
Pathway
crot00740
Riboflavin metabolism
crot00790
Folate biosynthesis
crot01100
Metabolic pathways
crot01110
Biosynthesis of secondary metabolites
crot01240
Biosynthesis of cofactors
Module
crot_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
144573712 (RIBA3)
00790 Folate biosynthesis
144573712 (RIBA3)
Enzymes [BR:
crot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
144573712 (RIBA3)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
144573712 (RIBA3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
144573712
NCBI-ProteinID:
XP_078179595
LinkDB
All DBs
Position
2:9906742..9910333
Genome browser
AA seq
529 aa
AA seq
DB search
MDCLLLGSPSLLHSIPNPSFQKLFGGFHNTGFGFVKRGLFKLQCYTIGGGTDFVQEDPLK
GRDNGSVFGLSDSSFKTISAEITQETTDFFVSDAEGDPDRPSDGYSSVDEAVRALQEGKF
VIAVDDENGVYEGDLIMAASLVKPQSIAFMIRHGSGIISVGMKEEDLERLMIPMMSSFTE
IEDISAAASTVTVDARVGISTGVSAEDRTKTILTLSSPDSKPGDLRRPGHVFPLKYRNGG
VLKRAGHTEASVDLVSLAGLQPVSVLSTIVDPIDGSMAGLPALKQMAMEYNMPIVSIADL
IRYRRKREKLVELVAIARLPTKWGLFSAHCYKSKLDGTEHIAVVKGDIGDGQDVLVRVHS
ECLTGDILGSARCDCGNQLDQAMQLIEKAGRGVVVYLRGHEGRGIGLGQKLRAYNLQDLG
SDTVEANVELGLAIDSREYGIGAQILRDIGVRTMRLMTNNPAKFVGLKGYGLAVVGRVPV
ISPITAENQKYLETKRTKMGHVYGSDLPGNLSEFSDFDLDVETQSKDEQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggattgccttttgcttggctccccctccctgcttcattccatccccaatccaagcttt
cagaaattatttggaggcttccacaacacaggattcggatttgtcaaaagggggcttttt
aagctgcaatgctacacaattggaggagggactgattttgtacaagaggatcctttaaaa
gggagggataacggatctgttttcggcctatcggattcctctttcaaaaccattagtgct
gaaatcacccaagaaactacagatttttttgttagtgatgccgaaggcgatcctgatcgc
ccttctgatggctactcctctgttgatgaggctgtcagagctttacaggaaggaaagttt
gtgatagctgtagatgatgagaatggagtatatgaaggagatttaataatggcagctagc
ttagttaagcctcaatccatagctttcatgattagacatggatcgggaattatatcagtt
ggcatgaaggaagaagatttagagagattaatgatccccatgatgtcttccttcacagaa
atcgaagacatctcggcagctgcttccacagtcactgtggatgcaagagtgggtatatca
actggggtatcagccgaagacagaacaaaaacaattctcacactctcgtcaccggattca
aaaccgggagatctgagaaggccgggtcatgtatttccccttaaataccgaaatggaggt
gttcttaaaagagccggtcacaccgaggcctcagtggatcttgtttctcttgccggattg
caacccgtgtctgttctctccacaattgtcgaccccatagacggctccatggctggacta
cctgccttgaaacagatggccatggaatataacatgcctatcgtatcgattgcagatttg
atcaggtataggaggaagagagagaaactagtagagttggtggctatcgcccggttgcca
acaaagtggggactgttcagtgctcactgttataaatcaaaattagatggcaccgagcac
attgcagttgttaagggagatataggagacgggcaagacgtactggtacgggttcactcg
gaatgcctaacaggtgacattcttgggtcagctcggtgcgactgtggcaaccagctcgat
caggcgatgcaattgatcgaaaaggccggcagaggggttgtagtctatttgcgtggccac
gaagggagaggcattggattgggtcagaagcttcgggcttataatttgcaagacctagga
agtgacacagtcgaggcaaatgtcgaattaggtttggcgattgattcgcgcgagtatgga
attggtgctcagatccttagggatattggtgtacgcacaatgcggctcatgacaaacaac
ccggcaaaatttgttggtttgaaggggtacggccttgcagtggttggaagggtgccggtt
atctcccctattacagctgagaaccaaaaatacctggagacgaaacggacgaagatggga
cacgtgtatggctctgatctaccaggcaatttgtctgaattcagtgactttgatttggac
gttgaaactcaatcaaaggatgagcaatag
DBGET
integrated database retrieval system
