Carex rostrata (bottle sedge): 144574016
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Entry
144574016 CDS
T11623
Symbol
HIT1
Name
(RefSeq) membrane trafficking VPS53 family protein
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
crot Carex rostrata (bottle sedge)
Brite
KEGG Orthology (KO) [BR:
crot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crot04131
]
144574016 (HIT1)
Membrane trafficking [BR:
crot04131
]
Protein recycling
Others
EARP complex
144574016 (HIT1)
Endosome - Golgi transport
Tethering complex
GARP complex
144574016 (HIT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
RINT1_TIP1
XhlA
COG5_N
COG4_m
MPH2
Motif
Other DBs
NCBI-GeneID:
144574016
NCBI-ProteinID:
XP_078179955
LinkDB
All DBs
Position
22:complement(8464897..8470705)
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AA seq
853 aa
AA seq
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MDKSSALEYINQMFPTEASLSGVEPLMQKIQTEIRRVDASILAAVRQQSNSGTKAKEELA
AATSAVQELMLKIKEIKTKAEQSETMVQEICRDIKKLDCAKKHITTTITALHRLTMLVSA
VEQLQVMAAKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELRDKFKNIKKILKSHVFSD
FSSLGTGKETEEPNLLQQLSDACLVVDALEPSVREELVKNFCNKELTSYRQIFEGAELAK
LDKTERRYAWIRRRLKTNEEIWKIFPQTWHVDYLLCIQFCKLTRTQLVDILNNLKEKPDV
GTLLLALQRTLEFEEELASKFGAGTEKSRSKESTNDDEEIEEDDEANDRKRIAEIRNRYQ
KKDASTEPDAKAQMEKDKQKDLGVPGAGFNFRGIISSCFEAHMTVYVELEEKTLMESLEK
LVQEETWETDEGSQTNILSSSMQVFLIIRRSLKRCSALTQSQTLFKMLEVFQRILKAYAN
KLYNRLPKGGTGIVAAATGTDGQIKTSDRDERMICYIVNTAEYCHKTSGELAENVSNMID
PQFVDKVDMSEVQDEFSAVITKALITLVNGVETKFDAEMLAMTRVPWASLESVGDQSEYV
NGINSILSTSIPVLGSLLSPTYFQFFLDKLAASLGPRFSQNIYKCKSISETGAQQMLLDT
QAVKTILLEIPALGKQTTVATSYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGT
LSDFQRILELKGLKKTDQQTILEDFNKHFTTATNIRHPSMVPSVALPPAATTALSSAPAS
AVVASISSASSAPATAFASALTTPLSAYSREDVLTRAAALGRGAATTGFKRFLALTEAAK
DKKDGPFRKLFNS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcaagtgctctggagtacattaatcagatgtttcccacagaagcatcgtta
tctggagtagagccactaatgcaaaagatacagactgagattcgccgggttgatgctagc
atacttgcagctgtcagacagcagagcaattcaggaacaaaagcaaaggaagaacttgca
gcagcaacaagtgctgttcaggaactgatgctcaaaataaaggaaattaagacaaaggcc
gaacagagcgaaacaatggtgcaagagatttgccgtgatattaagaaattggattgtgct
aagaagcatattacaacaaccatcactgctcttcaccggctgaccatgctcgtgtcggca
gtggagcaacttcaagtaatggcggcaaaaagacaatacaaagaggcagctgcccaatta
gaggcagtaaaccagctatgcagccattttgaagcatacagagatgtgccaaagataaca
gagctaagagacaagttcaagaacattaagaaaatacttaaatctcatgttttttctgat
ttttcaagcttaggaactggaaaggaaacagaagagccaaatctattacaacaactgtcg
gatgcgtgccttgttgttgatgctttggagccttctgtcagggaagaattagtcaagaac
ttttgtaataaggaactcacttcatatcgtcaaatctttgaaggagcagaacttgcaaag
ttggacaagacagagaggaggtatgcatggataaggaggcggctaaagacaaatgaggaa
atatggaagatatttccacaaacttggcatgttgactatctgctttgcattcaattctgc
aagcttaccaggacacaacttgttgacatactgaacaaccttaaagaaaagccagatgtc
ggcaccttgctattggctttgcagagaaccctagaatttgaggaggaactggcttccaaa
tttggtgctgggactgaaaaatctcgaagcaaagaatcaactaatgatgatgaagaaatc
gaggaagatgatgaagcgaatgaccgcaaaagaattgccgaaatccgaaatagatatcag
aaaaaggatgcctccactgaacctgatgccaaagcccaaatggaaaaagacaagcagaaa
gatcttggagttcctggtgcagggttcaattttagaggcatcatctcatcatgttttgag
gcacatatgacggtctatgtcgagctggaggagaaaaccctaatggagagcttagaaaaa
cttgtacaggaagaaacatgggaaacagatgaaggaagtcaaacaaatatcctatcaagt
agtatgcaggtgtttttaattatccgcagaagtttgaaaaggtgtagtgctttgacccag
agccaaaccctgttcaaaatgttggaggtgttccagaggatactgaaagcatatgcaaac
aaactatacaatagattgcctaaaggtggtacaggcatagttgcagctgcaactggcact
gatggacaaatcaagacctcagatagagatgagagaatgatatgctacatcgtgaataca
gcagaatactgccataagacgtcaggggagctagctgaaaatgtctcgaatatgattgat
cctcaatttgttgataaagttgacatgtctgaagttcaggatgagttctcagcagtgata
acaaaagcattaataacacttgtgaatggagttgagactaaatttgatgctgaaatgctt
gcaatgacgcgggtcccatgggctagcctggaaagtgttggtgaccaatctgaatatgtg
aatggcataaattctatactgtcaactagcattcctgtgcttggttctcttctctcgccg
acctacttccaatttttcttggacaagctagcagcctcgcttggtccccggttctctcaa
aacatatataaatgcaagagcatatcagaaactggcgcacaacagatgctgctcgacact
caggctgtgaagacaatcctattggaaataccagctttagggaagcagaccacagttgca
acaagctattcaaagtttgtgagtcgggaaatgagcaaagctgaagctcttttaaaggtc
attttgtcaccagtggattcagttgcaaatacatatagagctcttcttcctgaaggcacc
ctttcagatttccaacgcattcttgaactcaagggcctgaagaaaaccgatcagcaaaca
atattggaggatttcaacaaacatttcactaccgctaccaacattagacaccccagtatg
gtccccagtgtcgctttgccacctgcagctaccactgctctgtcctctgctcctgcttcc
gctgtagtggcttcaatttcttcggcatcttcagctcctgctactgcttttgcttctgct
ctgacgactcctctttctgcctactcccgagaggatgtgctgacacgtgctgctgcactt
ggccgtggggctgccaccaccggcttcaagcgcttccttgcattgactgaggctgctaaa
gacaaaaaagacgggcctttccgtaaattgttcaactcttga
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