Caenorhabditis remanei (nematode): GCK72_000261
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Entry
GCK72_000261 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06636
structural maintenance of chromosome 1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_000261
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
GCK72_000261
Meiosis-specific proteins
Cohesin complex and associated proteins
GCK72_000261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
Phage_phiJL001_Gp84_N
Motif
Other DBs
NCBI-GeneID:
9800168
NCBI-ProteinID:
XP_053591015
UniProt:
A0A6A5HLM8
LinkDB
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Position
I:1977564..1995099
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AA seq
1270 aa
AA seq
DB search
MRGSSSLDSLPGKGHLDTLEIENFKSYKGFHLIGPFSRFTAIIGPNGSGKSNLMDAISFV
LGERPGSLRVKKYTDLIHGAPINKPVAKKCRVTMNYKYADGRKKAFTRGVNNGVSEHLLD
GQLVTGQVYAHEMESINIFIKARNFLVYQGAIENIAMKNPKERTQLFEELSRSHEFQTEY
DKLKIEMTKAEDDTQHNMNKRRGIAQEKREAKMEKDEAEKYQQLKNDLAAKSTMLYLHQL
FHCERLINESREQISEQKKAIANLERTKTEEESKIANVHQDHKKVQREVQKLSRKLDQNE
SELLEKQQEMLTLKVSVAHEQKKLETAKKMLSAAEAKAENNTSQLAELKKRKKELVKEKT
SYEKEIQEMMQRGELNLSEEQVREYEELKDRAHRESALVQRELLTSIQVFEGDKSALSHE
LRRQKEAQDRVKAKEADVQRLERQISALGQKIKETEEENKALKDNLRKIESEVVIDKSAA
AEYNKELVSVIRQLSDASGDSAEGERNQKRTEALDGLKRNFPDGVFGRLVDLCQPSHKRF
NIATTKILAKHMNSIVCDNEETAARAIAFLKENRYAPEVFLPNEALVVNPINEKLREIRR
PAGVKLVFDVINVHHQAARKALQFVCGNSLVCENQEDAKQLAYGGTDLRDRYKAVSMDGT
LFQQSGVMSGGSADLRAKSKKWDEKVVKQLREKRDDLNEKIADLQKNRRREIEVEGERSK
IASSEQRLQIWKKELKNLREMQLERLQNELEGLTAELNIPESPTGKKKCAKARRAVQELQ
TKSNEVADRIFADFCQRVGIESIRDYENREMRIKQEMEDKLRSFDDDIQKLTYEIDFVTE
QDGQRKVDVEKEKVSQIEKSYKEMKSKEKSAASDLKKHTESMKEAKEVLDEKKEAASRLE
TEWNEVKKLAQTAMKEFTKAEKELLRLESLLTKKQYERHSLLHSVKLGQLALPLKSGSMA
DVEYEEDDGDDSSSQSSQQSQHDGPSVSDEQIQREQHIKINYDSLPSEYKDIDDDDGVRQ
ATNRLNVEIEELQKNVSKMNAPNLKANQRMAEVREREAESTEELENARKKAKRIRQAFEK
VKTDRYRRFQDFFDPVANTIDDIYKQLSRNTSAQAFLGADNMEEPYLDGIQYNCVAPGKR
FRPMDNLSGGEKTIAALALLFAVHGRNPAPFFVLDEIDAALDNTNIGKVASYICDSAREH
MQIIVISLKEEFYNKADSLIGIFPYPAACTTSGVLTFDLTRFKQLGINEMTENPPASSSA
AAAATAAASH
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcagtagctcgctggacagtttacccggcaaaggacatctcgacacgctggaa
attgagaatttcaaatcgtacaaaggatttcatctcatcggtccattcagtcgattcact
gcgattattggaccgaatggatcaggaaaatccaatttgatggacgcaatttcgttcgtt
ttgggagaaagaccgggtagtcttcgtgttaagaagtatactgacctaatccacggcgct
ccaatcaacaaaccagtggcaaagaagtgtcgagtgacaatgaactacaaatatgcggat
ggaaggaagaaggcgttcacacggggagtgaataacggagtgtctgaacatcttctagac
ggtcaattggtcactggacaggtctacgctcacgaaatggaatcaatcaatattttcatt
aaagccagaaattttttggtttatcaaggagccattgagaatattgcgatgaaaaatcca
aaagaaagaactcaactgttcgaagagctctctcgttcccatgaatttcagacggaatac
gataaattgaagattgaaatgacgaaagccgaggatgatactcaacacaatatgaataaa
cgacgaggaattgctcaggagaaacgagaagcgaaaatggagaaagacgaggcggagaaa
tatcaacagttgaagaatgatctggctgcgaagagcacgatgctctatcttcatcagtta
ttccattgtgaacgattgattaatgaatcgagagaacagattagtgaacagaagaaggct
attgcgaatttggagaggactaagacggaagaagagtcgaaaattgcgaatgttcatcaa
gaccataagaaagtgcaacgtgaagtgcagaaactgtctcgaaaactcgaccaaaacgag
tcggaacttttggagaagcaacaagagatgctcactctgaaagtgtctgtcgctcacgaa
cagaagaaattggagacggcgaagaaaatgttgtcggcggcagaagcgaaagcggagaac
aatacgagtcagttggctgaattgaagaagagaaagaaagagttggtgaaggagaagacg
tcgtacgaaaaggagattcaagagatgatgcaacgcggtgagctgaatctatccgaagag
caagtccgtgaatacgaagagctcaaagatcgtgctcaccgagaatcggctctcgttcaa
agggagctcctcacgtcgattcaagtgttcgaaggtgataaaagtgcattgagtcacgag
ttgagacgacagaaagaggcacaagatagagtaaaagcgaaggaagcggatgttcaacga
ttggaacgacagatttcggctctcggacagaaaattaaggagactgaggaggagaataag
gcgttgaaggacaatttgagaaaaatcgagagtgaagtggttatcgacaaatccgcagcc
gccgaatacaacaaagagctcgtctcagtgattcgtcaactgtcagatgcctccggagac
tctgcagaaggcgagaggaatcagaagagaacggaagcactcgatggactcaaaaggaat
ttccccgatggagtattcggacgactcgttgatttgtgtcaaccgtcgcataaacgattc
aatattgcgacgacgaagattctcgcgaaacatatgaacagtattgtttgtgataatgag
gagactgcagcgagggctatcgcttttttgaaggaaaaccgttacgcgccggaagtgttc
ctgccgaatgaagcgctcgtcgtcaatccgatcaacgagaaattgcgtgaaatcaggcgt
ccggcgggtgtgaaactcgtcttcgacgtcatcaacgtccatcatcaggccgcccgaaaa
gcgcttcaattcgtttgtggcaattcgttggtctgtgagaatcaagaggacgcgaaacag
ttggcttacggtggaactgatctacgagatcgatacaaggccgtgtcgatggatggaaca
cttttccagcagtcgggagtcatgtcgggaggatccgctgatttgagagccaaatccaag
aaatgggatgagaaagtcgtgaaacaactccgtgagaaacgtgacgatttgaacgagaag
atcgccgatctccaaaagaatcgtcgtcgagaaatagaagttgagggagaacggtcgaag
atagcgtcgagtgagcagagacttcaaatatggaagaaagaattgaagaatctgagagaa
atgcaattggaacgacttcagaacgagttggagggtctgacggccgagttgaacatcccc
gaatcgccaactgggaagaaaaagtgcgcaaaagcgaggcgggccgttcaggagctccaa
acgaagagcaacgaagtcgctgatcgaattttcgccgatttttgtcaacgcgtcggtatc
gaatcgattcgagattacgagaatcgagagatgagaatcaaacaagaaatggaggataaa
cttcgttcgtttgacgacgatattcagaagttgacgtacgaaatcgactttgtcaccgaa
caggacggacaacgaaaagttgatgtggagaaggagaaggtgtcacaaatcgagaaatca
tacaaagagatgaaatcaaaggagaagtcggcggcgtccgatttgaagaaacacacggaa
tcgatgaaagaggcgaaagaagtgctcgacgagaagaaggaggcggctagtcgactggaa
accgaatggaatgaagtcaagaaattggcacagacggcgatgaaagagtttacaaaggcc
gaaaaggaattgttgcgattggagagtcttttgacgaagaaacagtatgagagacactct
ttgctgcattctgtcaaattgggacagttggcgttgccgttgaaatcgggtagtatggct
gatgtcgagtatgaggaggatgatggagacgacagttcatcgcagtcatctcaacagtct
caacacgatggaccgagtgtatcggatgaacagattcaacgagagcaacacatcaaaatc
aactatgactcattgccaagcgaatacaaagatattgacgatgacgacggtgtccgtcag
gcgacgaatagactcaacgtagaaatcgaagagttacaaaagaatgtatcgaagatgaat
gcaccgaatctgaaagcgaatcaacgaatggctgaagtgagagaacgagaagccgaatcg
acggaagaattagagaatgcgaggaaaaaggcgaagagaatcagacaggcattcgagaag
gtaaaaaccgatcgttaccgccgattccaagactttttcgatccggtggccaacacaatt
gatgatatctacaaacaactgtctcgtaacacctccgctcaggcgttcctcggtgcggat
aacatggaagaaccgtatctggatggaattcaatataactgtgtagcgcccggaaaacga
ttccgtccgatggataatttgtcgggaggagagaaaacgattgccgcgttggcattgcta
ttcgcagtacacggaaggaatccagcgccgttctttgttttggatgagattgatgctgcg
ttggataatacgaatattggaaaggtggcctcatacatctgtgattcggcacgcgaacac
atgcaaatcattgtgatctcactgaaagaggaattctacaacaaagccgactcactcatc
ggtatcttcccgtatccggcggcgtgtaccacttcgggagttctcactttcgatttgaca
cgtttcaaacagttgggaatcaacgagatgactgaaaatccgccggcgtcttcgtctgct
gccgctgcggctacagctgctgcgtctcattaa
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