KEGG   Caenorhabditis remanei (nematode): GCK72_000658
Entry
GCK72_000658      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_000658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_000658
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_000658
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GCK72_000658
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GCK72_000658
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RSE1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_TEP1_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_Aladin Beta-prop_Vps41 WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 9821127
NCBI-ProteinID: XP_003109343
UniProt: E3M357 A0A6A5HMN9
LinkDB
Position
I:complement(<4249829..>4251096)
AA seq 373 aa
MFGSSSFGNKSLFGGGTSMSTTASTTANNTQDQDFLVEGAPEDTIQVIKFSPQPQDKPMI
ACGAWDGTIRVWMLNEANTFEGKAQQNIPAPILDICWIEDSSKIFMACADKEARLWDLAS
NQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMASVSLPERVY
AADVMYPMAVVALANKRIKVYNLENGPTEVKDIESQLKFQIRCISIFRDKTSQMPAGFAL
GSIEGRVAVQYVEAANPKDNFTFKCHRSAELVNGYQEIYAVNDICFHPQHGTLVTIGSDG
RYSMWDKDARTKLKTSEPHPMPLTCCDVHSSGAFLVYALGYDWSRGHEGNTQPGSKIVIH
KCVEDMKPRPPKK
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgttcggatcatcgagcttcggaaacaagtcactgttcggcggaggaacaagcatgtcg
acaacagccagcacaaccgccaataacacacaagatcaagacttcctggtagaaggagca
ccagaagacacaattcaagtaatcaaattcagccctcaaccacaagacaaaccaatgatt
gcatgcggagcatgggacggtacgatccgtgtatggatgctgaacgaggcgaacacattc
gaaggaaaggctcaacagaacattcccgcaccaattctggatatttgctggattgaagac
agttcgaagatctttatggcttgtgcagacaaagaagcacgactttgggatcttgcttcc
aatcaagtagcagttgtcggaacacacgatggaccagtgaagacatgtcattggattaat
ggaaacaactatcagtgcttgatgactggatcatttgacaagacacttcgattctgggat
atgaaaaatcttccaaatcaaacgcaaatggcttcagtctcattaccagaaagagtttac
gcagctgatgtgatgtatccaatggctgtcgtggcactggctaacaagagaatcaaagtt
tataacctggaaaatgggccgacggaagtaaaggatatcgaaagccaactgaaattccaa
atcaggtgcatctcgatcttcagagacaaaacgagtcaaatgccagctggtttcgctttg
ggatctatcgaaggacgtgttgccgtgcaatacgttgaggctgctaatccaaaagacaac
ttcacattcaaatgtcacagatcagctgagcttgtcaatggatatcaagagatttacgct
gtaaacgatatttgcttccatccacaacacggaacactcgtaacaatcggatcggacggt
cgctattcgatgtgggataaggatgcgcggacgaaactgaaaacttccgaaccacacccg
atgccattgacgtgctgtgatgtgcacagttctggagctttcctcgtttacgcgttggga
tatgactggagtcgaggacacgaaggaaatacccaaccaggatcaaagatcgttattcac
aaatgtgttgaagacatgaagccacgacctccgaagaagtga

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