Caenorhabditis remanei (nematode): GCK72_000798
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Entry
GCK72_000798 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
crq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_000798
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
GCK72_000798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_000798
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
GCK72_000798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ABC2_membrane
AAA_23
R1_ABCA1
Motif
Other DBs
NCBI-GeneID:
9821228
NCBI-ProteinID:
XP_053591332
UniProt:
A0A6A5HN14
LinkDB
All DBs
Position
I:complement(4859539..4877795)
Genome browser
AA seq
2279 aa
AA seq
DB search
MVGFWRQLNFLLWKCVLVRRRQKFWLAVELIVPCILFIIIALVRTKDFSEGMPQCHYDSK
GMLSAGVLPFIHSFFCSFSNRCNAIPTSGDERQFLFNDDGEHTRNESIIVDAIYYSSLQL
RWIGKNPKKFEDLTKGGAEIIHWLAGKPLNTTEIIRIGDLFDVSIRENLTKALNNTGLQL
ETARKLMNAQLETGAIEVYDVLRNELSWTDLLFSNPFFCDERMFEKTFSFEKGHEMTSDE
RDELCDVLTLAELMDYKGYISEITIPTVSRMRATTFMTSFQNLFEPSIIFFQKYSNYTTE
QLLLALFCGEDPRDVIEQTINPNNDKNVETPFEKLRKQVVKFIQTVTPGKEQEKNSTCTP
IPYHNDMNCSSLESPILMKVRAALSGYILVTPDNPATRRVVERLNLPLRDVEHIRNLLFN
YPSDALEFQDRLHASDLWPASQKLLHFITVYKDGQNPLNNKTIRFLLEHLFAPSSDEYSF
GSFTKNITELANKYTGCFLLDRFRFVSDEKELETNAVCLMESHQYFTGIVFDMESNATKF
DGFTTYKIRHYPEMIDSTTSFMDSKSNPFTRDKPLIDLKYLTFGFSFLQEAIDRAIISEK
SNLPDAHLGVYSQQEPFPCTVKDTFNVAIFMPLFLLISFIFPSALLVKNIVYEKEQKIKE
QMRAMGLGDAVHFVSWALISLVLNFVSVLVISIISKVAKIFDYTDYTLLLFVLVLFLFAS
IAMSLFFSTLFTNANIATAATCVLWFVFFIPFQLLRTDRVTSPTFNRIALLLPPTAMGHC
FKLLESFNAMERASWSDLGEMSNPDLGVSVELCMAMLLVDTAVFLILAWYISAVAPGEYG
VRQPLYFPFTLRYWAPGLYKNRVEFIDDEHFDVIPTSDSFDSEPTNLNLTVHINSMSKVY
ENGTKALDCLNLRLYEGQITGLLGHNGAGKTTTMSILCGLYSPSSGTAKIYQRDIRTDLR
RVRDVLGICPQHNVLFSHLTVAEQLRLFAALKGVPDNDLDSQVEEILASVSLTEKANKLA
STLSGGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQRNKEGRTILLSTHH
MDEADVLSDRIAILSQGQCITIGSSVFLKRRFGNNMTLAMVKEDSRVDYTRISSEIVELG
GDIGLVVGDENEEEIVFKIPIQTESDKLEKFFHDLDENLEKYRLGQYGISAPTLQNIFVS
LAPQKEYHVPKVVRCGWFRRLKEKFCHTRHEEEENDLIAQNPVMIENNMPQNNEPEEVKF
EDFEKPDLLHGKRLVFQHFLALLVCRMNYTLKSKRTFLFQVIIPLVLLAVAELFVVLQVS
SSRPDLMTSMPPLPMETSILGNHSDFYVNSWDTMDNSTATDILHSMFQSPGTGPRCARDT
PSDLLATIRRELLFRNRYGWGRNMPPPGVKKDAVENEYQCRDIEGEFDYTEDISNVTYNE
PIYCGCEDFGWNCTLEDWPWRETPWLRLNTTDRIFDLSGKNLTQFRMVTRNAALSNATAP
FFLGGFSLGHVNQRAQSQADIDISKSGWLETVKDISEAIVIINLNVTGMEPSTPKVKDPF
AENITTTKVIDDLLQNLDVKQNVKVWFNNKIWPGLPITSNILSNALLRMEDENIAPEDLG
ILTMNHPMNKTISQTLDQNALRFTQTLALFRITCLLLVLSMIPAGFTVYLVEDRICEAFH
LQIVGGLRKLTYWVTSYLYDLTVYTCVILIIMLIYICFRVTDFTADGATFFSFLLLFFMH
GMSAILYAYVFQKMFSVPALSFVLIAIGSYFVGIVCALTVIMLETLMVQDPTLVPAHNIC
AIVFLVLPQYNLGIAIFRGLMIYQVRKIGSNFLEQINRPDMIDQLPLPALLSIDQMGIHV
MCLGLHVILATICLILSQMDEFGFVRKRERVLTNGMMLREPTHEEDEDVVKEKNRVDAIP
SDGSNNHALVVRNLAKAYNPELLVVKGISFAVEPGECFGLLGLNGAGKTTTFSMLTAKIR
PGHGSIEMQDTRINTGSFSDVRNFQQLGYCPQFDALNMKLSTRENLKFYARIRGIVPTQI
DSIVDRLLIALHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPGSQQ
FLWKVIERLCKSGKAVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKFGKGSML
TMKMGKDENSREIAGILKAKLGEGSRIEAVHCSTIFIHIEQGAASVARVLEIVNQIKKMY
DVDDFTLSQSTLDNVFQSIAESDASSSSSSSSIPDISPSATLTINRNNTGSTYVIASDQ
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggttggattttggcgccaactcaactttttattatggaaatgtgttctggttaggagg
agacagaaattctggttggcggtcgaacttattgtaccatgtattctcttcattattatc
gcacttgtaaggaccaaggatttttcggaaggaatgccacaatgtcactacgactcgaaa
ggaatgctctctgctggcgttctcccattcattcactcgtttttctgttcattctcgaat
cgatgtaatgcaattccgacgagtggagatgaacgacaatttctgttcaatgacgacgga
gaacacacgagaaatgagtcaataatcgtcgatgcaatctactactcatccctccaactc
cgatggattggaaagaatccgaaaaagtttgaagatttaacgaaaggaggtgccgagatc
attcattggcttgctggaaaaccactgaatacgactgaaatcattcgaatcggtgatctt
ttcgatgtttcaatccgagagaatcttacgaaagcattgaataatactggacttcaatta
gaaacagctaggaaactgatgaatgctcaattggaaacaggagccatcgaagtgtatgat
gtgttgagaaatgagttatcatggactgatcttctcttctcgaatccatttttttgtgat
gagagaatgttcgaaaaaacgttctctttcgaaaaaggacacgagatgacaagtgatgag
agggacgagttatgcgatgtcttgacgttggctgagttgatggattataaaggatatatt
agtgagatcacgattcccacggtctcccgaatgcgtgcaaccaccttcatgacatcattc
caaaatctgttcgaaccatcgataatctttttccaaaagtattcgaattatacgacagaa
caattacttttggcattattctgtggagaagatccgagagatgtcatcgagcagacgatc
aatccgaataacgacaaaaatgtggagacgccgttcgagaaattgaggaaacaggtcgtt
aaatttattcaaacagtgacacctggaaaagagcaagaaaaaaacagcacgtgcaccccg
ataccgtatcataatgacatgaattgctcttccctagagagcccaattctgatgaaagtg
agagctgcactctctggttatattctcgtgactccggataatccggcgacgagaagagtt
gtggagaggttgaacttgcctcttcgagatgtggaacatattcggaacttgttgttcaac
tacccttcggacgcgttggaattccaggatagacttcatgcttcggatttgtggccggct
agtcagaaactgctccacttcatcactgtttacaaagatggccagaatccactgaacaac
aaaacgatccgattcctactcgaacatctcttcgccccgtcttcagatgaatacagtttc
ggaagtttcaccaagaatatcacagaacttgccaacaagtatacagggtgcttccttctc
gaccgtttccgatttgtgagtgatgagaaggagctggaaacgaacgccgtgtgtctaatg
gaatcccatcaatatttcactggaatcgtcttcgatatggagtcgaatgcaacgaaattt
gatggtttcactacttataagatcagacactatccggaaatgatcgattccacaaccagc
ttcatggatagcaaaagcaacccattcacccgtgacaaaccgctcatcgatctgaaatat
ttgacgtttggattctcgtttttgcaagaagccattgaccgagcgatcatcagtgaaaaa
tccaatttgccagatgcgcatctaggtgtctattctcaacaagaaccgtttccatgcacg
gtgaaggatacattcaacgtggcaattttcatgcctcttttccttctaatctcattcatc
ttcccgtcggctctactcgtgaaaaatattgtctatgagaaggagcagaagattaaggaa
caaatgcgagctatgggtcttggagacgccgttcatttcgtctcatgggctttgatctca
ctggttctcaactttgtctcagtacttgtcatatctataatctcaaaagtcgcaaaaatc
ttcgactacacagactacacacttcttctttttgtactcgttttgttcttgttcgcatcg
atagccatgtcattgttcttctcaacactattcactaatgctaatattgcaactgctgcc
acgtgtgtcctctggttcgtcttcttcataccattccaacttctcagaaccgatcgtgtt
acatcgccaactttcaatcggatagcgctccttctcccaccaaccgcaatgggacattgc
ttcaaactactcgagtcattcaacgcaatggaacgtgcctcgtggtcggatctcggagaa
atgagcaacccggatctgggtgtctctgtggagctctgtatggctatgctacttgtcgac
actgccgttttccttatcttggcatggtatatttctgcagtggcacccggagaatatggt
gtcagacaaccattgtatttcccgttcactttgagatattgggcacccggattgtacaaa
aatcgagtggaattcattgatgatgagcattttgatgtgataccgacaagtgactcattc
gactcggaacccactaatctcaatttgacggttcacatcaactcgatgagtaaagtgtat
gaaaatggaacgaaagcgttggattgcctaaatttgagactttatgagggacaaatcacg
gggttgctgggacataatggagctggaaagactactacgatgtctatcctctgcggactg
tactctccgtcctccggaactgctaaaatctaccaaagagacatccgaacggatcttcga
cgagtcagagatgttcttggaatatgtccacaacataatgttttattcagccacctaacc
gttgccgagcaactccggctcttcgccgcactcaaaggtgtcccggacaatgatctggat
tctcaagtggaagagattttggcgagtgtctcgttgactgaaaaagcgaataagttggcc
agcacgttgtcgggaggaatgaagcgaagactgtgtatcggaatagcgttcatcggaggg
tctcgatttgtgattctcgatgagccgacggctggagtggatgtgacggcgagaaaagat
atttggaagttattgcagagaaataaagaaggccgcacaattcttctctccactcatcat
atggatgaagctgatgttctttctgatcgaattgctattctctcgcaaggtcaatgcatc
acaattggatcgtcagttttcttgaaacgaagattcggaaataatatgacactggctatg
gtcaaggaagattctcgagtcgactacacacggatctcatcagaaattgttgaattggga
ggagatattgggctggtagttggagatgagaatgaggaggagattgtgtttaaaatccca
atccaaactgaatccgacaagttagagaagttcttccacgatctcgatgagaatttggaa
aaatatcgactaggacagtatggaatttcagcaccaactcttcagaatatctttgtctct
cttgctcctcaaaaagagtaccatgtgccgaaagttgtgagatgtggatggtttagaagg
ttgaaggagaagttttgtcatacaagacacgaggaagaggaaaacgatttgattgctcag
aatccggtgatgattgagaataatatgccgcagaataatgaaccagaggaagtgaaattt
gaagatttcgaaaaaccagacctcctccacggcaaacgtcttgtcttccaacacttcttg
gctcttctcgtgtgtcgaatgaactacactctgaaaagtaaacgaaccttcttattccaa
gtcatcattcctcttgtcctcctggccgtggccgaacttttcgtcgtcctccaagtctct
tcatcccgtccggatctcatgacgtcaatgccacctcttccgatggaaacgagtattctc
gggaatcatagtgatttctatgtgaattcttgggatactatggataactcaacggccacc
gacatcctccattcgatgtttcaatcgccgggaactggaccgagatgtgcgagagatacg
ccttcggatttattagccacaatccgtcgagagcttctattccgtaatcgatatggttgg
ggaaggaatatgccgccaccgggagtcaaaaaagatgcagtggaaaatgaataccaatgt
cgggatattgaaggagaatttgactacactgaagatatttccaatgtcacatacaatgaa
cctatctattgtggatgtgaggatttcggatggaattgcactttggaagactggccgtgg
agagaaaccccctggctccgcctcaacaccaccgaccgtatctttgacctatccggaaaa
aacctgactcaattccgaatggtgacaagaaacgccgcattgtccaatgccactgctccg
ttcttcttgggcggtttctcactgggacatgtcaatcagagagctcaaagtcaagcggat
atcgatatttcgaaaagtggatggctggaaactgtcaaggatatatctgaggcaattgtg
ataattaatttgaacgtgactggaatggaaccatcaacaccgaaagttaaagatccgttt
gctgagaatataacgacgacgaaagtgatcgatgatctactccagaatctggatgtgaaa
caaaatgtgaaagtgtggttcaataataagatatggccaggtctaccgatcacttcgaat
atcttgtccaatgcattgttacgtatggaggatgagaatattgctcctgaagaccttgga
atcctcacgatgaatcacccgatgaacaagacaatctctcagacattggatcagaatgcg
ttaagattcacccagacactggccttgttccgtatcacttgcctcctcctagtcctctca
atgatccctgctggattcactgtctacttggttgaagacagaatttgtgaagcatttcat
ctgcaaatcgttggaggactcagaaaattgacatactgggtgacaagttatctttatgat
ttgaccgtgtacacatgcgtgattctcatcataatgttgatctacatctgcttccgagtc
actgatttcaccgcagatggggccactttcttctcgttccttttgttgtttttcatgcat
ggaatgtctgcaattctctatgcatatgtattccaaaagatgttttctgtccctgctctc
tcgttcgttctcatcgcaatcggatcgtattttgtgggaatcgtctgcgcgttgacggtt
atcatgctggagactcttatggttcaggaccccactctagtccctgcccacaacatctgt
gcgatcgttttcttggttctccctcagtacaatttaggaatcgctatcttccgaggactc
atgatctaccaagttcggaagattggatccaactttttggaacaaatcaaccgtcccgat
atgatcgatcagctaccacttccggctcttttgtcaattgatcagatgggaattcatgtg
atgtgtcttggtcttcatgtgattctcgcgacgatttgtttgattttgtcgcagatggat
gaatttggatttgtgagaaaacgagaacgcgttctgacgaacggaatgatgctccgtgag
ccaactcacgaagaagacgaagacgtcgtcaaagagaagaatcgtgtcgacgcaatccca
tctgatggatccaacaaccacgctctcgttgtcagaaatctcgccaaggcctacaatccg
gaactcctcgtcgtcaagggtatctcttttgccgtcgaaccgggagagtgtttcgggtta
ctgggactcaatggtgctggaaaaacgacgactttttcgatgctcactgcgaagattcga
ccgggacacggatcgattgaaatgcaggatacaagaatcaacactggttcattctcggat
gtccgaaatttccaacaacttggttactgtccacaattcgatgcgttgaacatgaagtta
tcaacaagggagaatctgaaattctatgcgagaatacgtggaattgtgccaacgcaaatt
gattcgatcgtcgaccgtctcctaatcgccctccaccttcgtccctacgccaacacccaa
acatccagtctctccggtggaaaccgtcgaaaactgtcggtcgccgtggcccttgtcagt
caaccatctcttatattcctcgatgaaccctctgctggaatggatccaggctctcaacaa
ttcctttggaaagtcatcgaaagactgtgcaaatctgggaaagcagtcgttctgacatct
cattcgatggaggaatgcgaggcattgtgcactcgaatcgccattatggatagaggaaga
attcgatgtttgggagggaaacaacatttgaaatcaaagtttggaaagggttcaatgttg
acgatgaagatgggaaaagacgagaattcgagagaaatcgcgggcattttgaaagcgaag
ttgggagagggatcgaggatcgaagctgttcattgttccactatatttattcatatcgag
cagggagcggccagtgttgctcgtgttttggagattgttaatcagatcaaaaagatgtat
gacgtagatgacttcactctatcccaatcgacacttgacaatgtgttccaatcaatagct
gaaagtgatgcatcctcatcctcgtcctcatcgtctatacctgatatctccccgagtgca
actctcacaattaatcgaaataatacgggatccacatatgtgattgcatccgatcaatag
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integrated database retrieval system
