Caenorhabditis remanei (nematode): GCK72_000803
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Entry
GCK72_000803 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05702
afadin
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
GCK72_000803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
9821258
NCBI-ProteinID:
XP_003109317
UniProt:
A0A6A5HLC0
E3M3I9
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All DBs
Position
I:4909796..4917445
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AA seq
1308 aa
AA seq
DB search
MRRFNSESRLQQETTFGVAPPITPNTPTTPTTNPSPYSPYQPAARPTPAARFFYHRRAAS
TDADPMPVPRPRRVTFSQPVDTKPPIPIPVTRVQTSSSNINSKLLKNLISGSSVSSSRQE
DLMMHSNNNILPPYSNSIGYSSSASKIAQEPFQIPISIQIGDYNVWDFLAEVMSNRAATS
SELSSFRLSPAYSLYLALRFFHAHNKPYSVQFFSRIESNFKQIAQECNSKDDLIFWLANA
SEFNHLVERDSELKTSRYGKISIEIERIFRRLVQILKGSIRPAARSLLDIHMDDRVATED
LIHLLDSTMRQARVCGLNAALTIQLCGHLLHMVNAFIFNSLVSVESPVSELTTRLGKCLQ
YRIESIHRFCERMGVELAAECHLDRTRQAANLLAAQKNDVATLGSTCYKLNSLQVVHLLS
GFQPENGEIPCDDDVIDRICHLAEKQADVLTLEDGQRMTLEEYEDLNLPFLIPQDGYFIE
QFKTVPDGLHQYLLQLQHRRLCHSVSMTGQQPLHPQMTSSMHAMHIGSENGGQKQHHYPS
HHPQQQQQPIVRSVSQTTLTSIPTTQFGDSFGSAASDTISKVTLRKNGGGIGLSIVAAQG
VGDRQMGIYVKKVVEGTPAAQDGRLETGDQLLSVNGHSLIGISQEDAARLMTQSAHEVHF
EVRKHAAHRNGLSNWLQPTTSITNGGHFVAPSPSTVPPPQYPPSYSNVGRNGSYDAPPPP
PPSYNQRFTSQQQQVPNGRNSAFVAPLSNSSSNASSNHMQQHYAHHNMHSGTVDPNANKH
YRSSSASDLQQDPNASFSQSSMTGSARSSLFDKLPSHYRHSTRPTVIQPTRPGAQSPSAL
RKNAASPANVSTSTTSNLYRPTSASNLFAPPRNSGGLVGYSSNAARESTQDIHRALNDLE
LNSPLARSTPNHDESYNSGSSYRIPPTVSNYAPLHSVRPASMYGYNSPSSSSTATGTTVI
PTVSLSNGGASRNHQNTTTTTSVNSSNNTSPRVNVTLGGAVSSSRSHNNINGSIHSSSQE
PAIVRPVDLNMPKAVPASIKGAVPTAITQALQLKQNGNGPVIRQIRPQSGLRERLQDADI
RNLEKTNIALMSYEAVNDELDRLESKGSTMTDEEQRRFRELLNVAHEQSRARKMLSEIKT
PPSHHQERDIPIYVQKEHRSESRRTETMIDDVPHSSSSVENMSPVSPPETRKVQFTDEIN
QYQTPTSNNTAMLFAADVPVLDSPGIVGTNEIYRDPRQRRLNELQDRNRNENNSDGAKLD
FRDKQRLFARQIGEDSIPRQRMDVSSAQRLIETDLNAATSPNSTHQRP
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtttcaactcggaatctcgtctacaacaagagacaacattcggcgtcgctccg
cccattactcccaatactcccaccactcccaccacaaatccatccccgtactctccatat
caacccgccgctcgtcccactccggccgcccgtttcttctatcatcgtcgtgcggcgtcg
acggatgccgatccgatgccagtgccacgtccccgccgtgtcacattctcccaaccggtc
gacacgaaaccaccgatacccataccagtgacacgtgttcaaacgagttccagcaatatt
aactcgaaattactcaaaaatcttatttccggttcatcggtctcctcatctcgacaagaa
gacctcatgatgcattccaataataatatcttgccaccgtattccaactcgattggatac
tcctcttctgcgtcgaaaatcgcccaggagccattccaaatccccatctcaattcaaatc
ggagactacaatgtatgggattttctggcggaagtgatgtcgaatcgagccgccacgtca
tctgaattgtcgtcgttccgcctgtcgcccgcctactctctctacttggctcttcgattc
ttccacgcccacaataagccgtactcggtgcaattcttctcgagaatcgagtcgaatttc
aagcaaatcgctcaggaatgcaattcgaaagacgatttgatcttctggcttgccaacgcc
tccgaattcaatcatctcgtggaaagggattctgagttgaagacgtcacgatatggaaag
atatcgattgaaatcgagagaatattcagaagattagtgcagattctgaagggatctatt
cgaccggccgcacggagtcttttggatattcatatggatgatcgggtggccactgaagat
ttgatacatcttttggattcaacaatgagacaagcgagagtctgtggtctaaatgcagcg
ttgactatccagttgtgtggacaccttctccatatggtcaacgccttcatcttcaatagt
ttggtctccgtcgagtctccggtatccgagttgacgacgagactcggaaaatgcttacag
tatcgcattgaatcaattcacagattctgcgagcgaatgggtgtcgagctggcagccgag
tgtcatttggatagaactcgtcaggctgcaaacctcctagccgcccagaaaaacgacgta
gcgacactcggatccacgtgctataagctgaatagtctgcaagtggtgcatcttctatca
ggattccaaccggagaacggagagattccgtgcgacgatgacgtcattgacagaatctgt
catttagctgaaaaacaggcggacgtgttgacactggaggatggacaacgaatgacactc
gaggagtatgaagacttgaatctcccattcctcattcctcaagatggatatttcatcgaa
caattcaaaacggtacccgatggattacaccaatacttgctgcaattacagcatagaaga
ctctgtcacagtgtctccatgaccggccaacagcctctccatccacagatgacgtcatcg
atgcacgcgatgcatattggatctgaaaacggaggacagaagcaacatcactatccatca
catcatccacaacaacagcaacaaccgatcgttagaagtgtttcgcaaacgacgttgacg
agtattccgacgactcaatttggtgacagtttcggaagcgccgcctccgatacgatatcg
aaagtgacgttgagaaagaatggcggaggaatcggattgagtattgtcgctgctcaggga
gtcggcgaccgtcaaatgggaatttatgtgaagaaagtggtcgaaggaacgccagctgca
caagatggacgactcgagactggtgatcagttgttgagtgttaatggacactcgttgatt
ggaatctcacaggaagacgccgcccgtctcatgactcaaagcgcccacgaagtccacttc
gaagtccgcaaacatgccgctcatcgcaacggactcagcaattggctccaaccaacgacc
tccatcaccaacggcggacatttcgtcgccccatccccatctaccgtaccaccaccacag
tatccgccgagctattcgaatgttggacgtaatggatcttacgacgctccgccaccacca
ccgccgagctacaatcagagattcacaagccaacaacaacaagttccgaacgggagaaac
agtgcattcgtggctccgttatcgaattcctcatcaaatgcatcgagtaatcatatgcaa
caacactatgctcatcataatatgcatagtggaacggtggatccgaatgcgaataaacac
tatcgaagttcatctgcaagtgatttacagcaagatccgaatgcctcattctcccaatcg
tcgatgactggaagtgctcgtagctctcttttcgataagctcccttcccactaccggcat
tccactcgtcctacagtaatccagccaactcgacctggagctcaatccccgtcggctctc
cgaaagaatgccgcgtcaccggctaatgtttcgacatcgacgacgagcaacttgtatcga
ccgacgtcggcgtcgaatctgttcgctccgcccagaaattcgggaggtctcgttggatat
tcgagcaatgctgccagggaatcgacacaggatattcatagagcgctcaacgacctggaa
ctcaactctccgctcgcccgttccacaccgaatcatgacgagagttacaacagtggcagc
agctaccgtatcccacctaccgtttccaactacgccccacttcactcggttcgacctgca
agcatgtatggatacaacagtccatcctcttcctcaacggccaccggaactacagtaatc
ccgacggtctcgttgagtaatggtggtgcatctagaaatcatcagaatacaacgacgacg
acttctgtgaattcatctaacaatacctcaccccgagtgaatgtgacattgggtggagct
gtcagctcatcgagatctcataacaatataaatggatcaattcattcttcttctcaggaa
ccagccatcgttcgacccgtcgatttgaatatgccgaaagcggtgcccgcgtcgattaaa
ggagcagtgccgacggcgattacacaggctctccaattgaaacaaaacggcaacggcccg
gtaatccgtcagatccggccacaatccggactccgagaacgtcttcaagacgcggatatt
cgaaatctggagaagacgaatatcgcattgatgagctacgaagcagttaatgacgaactc
gatcgtctcgaatcgaaaggatcaacgatgacagatgaggagcagagaagatttcgagag
cttctaaacgtcgctcatgaacagagtcgagcgagaaaaatgctctcggagatcaagact
ccgccctctcatcatcaagaacgagacattccaatctacgtgcaaaaagagcatcgatca
gagagtcgacggacggaaacaatgattgacgatgtgcctcattcgagttcaagtgttgag
aatatgtcacctgttagtccaccggagacgagaaaagttcaattcacggatgaaatcaat
caatatcagacgcccaccagcaataatacagccatgttattcgctgctgatgtgcccgtt
ttggattcaccagggatcgtcggcaccaacgaaatctaccgtgatccccgtcaacgtcgt
ctcaacgaactgcaggatcgaaaccgaaatgagaacaattcggacggtgcgaagttggat
ttccgtgacaaacaacgactattcgctcgtcaaatcggagaagactcgattccacgtcaa
cgaatggacgtgagcagtgcgcagcgactgatagagactgatctgaatgctgcaacttca
cccaattccacacatcaacggccataa
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