Caenorhabditis remanei (nematode): GCK72_001004
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Entry
GCK72_001004 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_001004
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_001004
Transcription factors [BR:
crq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
GCK72_001004
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
GCK72_001004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
DUF4429
Motif
Other DBs
NCBI-GeneID:
9801744
NCBI-ProteinID:
XP_003111448
UniProt:
A0A6A5HLW0
E3LY91
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All DBs
Position
I:5776603..5778983
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AA seq
702 aa
AA seq
DB search
MTDLEFSNVFLENMGVLIPGTLKFDGTSAVFKSDKKVVKVQVSDIKGIRWQKLGNKPGIR
FALQDGSSQRMGGFKDSDFEKVNSFTDSNWNVRIVQSDLFIKGWNYGHAEVKGKNILFSS
EKQPLFEIPCTNVSQCVANKNEAILEFHQNENIPVSLMEMRLYMPVDPEMEDETDKVEEF
KKAVLAYAGLEAETEQPITLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKSINR
LFLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLVFEFVKEDDQEMEITLTDELEEKYGNNL
KRDLDGPLYENVSILFKVVCNLKVTVPGRFIGNSGTPAIQCNHKQNPGLLYPMEKGFLFI
HKPVMYIRFEEISSCHFARSDAGTVTRTFDFEVDLKNGSSLMFNTMEKEENAKLFDYLNK
KDIKIRNSTRIDNKKNDVDSSDEEHDPYKATVTAEGRGKDNSDDDVSTDEDYDLDKDLKK
QKVDRDSSEGSGSEPDDEYDSGSEEDASGTGESEPDEENSGNKKKKSEKTKKSREPMKPK
LGKNGKEKKEKKVKDPLEPKRATTAYFLWFQANRLSFKEDGDTVADVAKKGGAKWKEMGS
DDKKEWEEKAAKDKARYEAEMKEYKKNGGGSSSASTSAKPAKKAPTSSPTKYKSKEHISD
SDDSDSDEEPKKAKKKPSREATPSDDSDENDIAPANSDDDSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctggagttctcaaatgtttttctcgaaaacatgggagttcttatcccggga
accctgaaattcgacggtacttctgcagtcttcaaaagcgacaaaaaggtagtgaaggtg
caagtgagcgatattaagggaattcggtggcaaaagttgggaaacaaaccaggaattcgg
tttgctctgcaagatggttcttctcaacgtatgggcggattcaaggattcagatttcgaa
aaagttaactcattcaccgattctaactggaatgttcgaatcgtacaatctgatctgttc
atcaaaggatggaactacggacatgctgaagtgaaaggaaagaatatattattttcatcg
gaaaaacagccgcttttcgaaattccatgtactaacgtctcacagtgtgtagctaataag
aacgaggcgattctggaatttcatcagaatgagaatattccagtctcgctgatggaaatg
agactttatatgccagttgacccagaaatggaagacgagactgataaagtggaggagttc
aaaaaagccgtattggcgtacgctggtctcgaagctgaaactgaacagccaatcactctt
ctcactgatattctgtgcacaacgccacgtggcagatatgacatcaaagtgtacccaaca
agcatcgctcttcacggaaaaacgtacgactacaaaattccagtcaaatcgatcaaccgt
ttgttcttggttccacacaaagatggacgtcatgtatatttcgtgctctctctgaatcca
ccaattcgtcaaggacaaactcgttacagttatctggtgttcgaattcgttaaggaggat
gatcaggagatggagatcacgttgactgatgagctcgaagagaaatacggtaacaatttg
aagcgcgatttggacggaccgttgtacgagaacgtctcaattctgttcaaagttgtttgc
aatctcaaagttacggtacccggaagattcattggaaatagtggaacacctgccattcaa
tgcaatcacaaacagaatccaggacttctgtatccaatggagaagggtttcttgttcatt
cataaaccagtgatgtatatccgattcgaagagatcagctcttgtcatttcgctcgttct
gatgctggcacagtcacccgtacttttgatttcgaagtcgatctgaaaaatggatcatcg
ttgatgttcaatacgatggaaaaggaagagaatgcgaaattgttcgattatttgaacaag
aaggacatcaaaattcgcaattctacacgcattgacaacaaaaagaatgacgtggatagc
agtgatgaggagcatgatccgtataaggcgacagttacagcagagggaagaggaaaggat
aatagtgatgatgatgtgagtactgatgaggattatgatttggataaagacttgaagaag
caaaaggttgatcgtgactcatctgaaggttctggaagtgaaccagacgatgaatatgat
tctgggtctgaagaagatgcgagtggaacaggagaatcggagccagatgaggagaattct
ggcaacaagaagaagaaatcggagaagaccaaaaagtcgagagaaccgatgaagccaaaa
ctcggaaagaacggaaaagagaaaaaagagaagaaagtgaaggatccactggaaccgaaa
cgcgcgacgactgcatactttttgtggttccaagccaatcggttgtcgttcaaagaggac
ggagatactgtcgctgatgtggcgaagaaaggaggagccaagtggaaagagatgggatcc
gatgacaagaaggagtgggaagagaaagctgccaaggacaaggcccgttacgaggcggag
atgaaggagtacaagaagaacggcggcggatcttcctctgcgtccacttctgccaaacca
gcaaagaaggcacccacttcgtccccaaccaaatacaaatccaaggaacatatcagtgac
tctgacgattctgattctgacgaagagccgaagaaggcaaaaaagaagccgtcgagagaa
gcgacaccttcagatgattctgatgagaatgatattgctcccgccaactctgatgacgat
tctgattaa
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