Caenorhabditis remanei (nematode): GCK72_001008
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Entry
GCK72_001008 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_001008
Membrane trafficking [BR:
crq04131
]
Protein recycling
Others
EARP complex
GCK72_001008
Endosome - Golgi transport
Tethering complex
GARP complex
GCK72_001008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
Vps54_N
EXOC6_Sec15_N
COG5_N
Vps53_N
DnaG_DnaB_bind
Sec8_N
COG2_N
PhoU
Baculo_PEP_C
Helicase_PWI
Ins_P5_2-kin
Phasin
Occludin_ELL
SKA2
Motif
Other DBs
NCBI-GeneID:
9802004
NCBI-ProteinID:
XP_003111271
UniProt:
A0A6A5HRF0
E3LY88
LinkDB
All DBs
Position
I:5786055..5788968
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AA seq
705 aa
AA seq
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MSSFSSVLDVTKPDFDVEAYVVKLLREKSLDGLVKEEEEMVSAVRRLDSDVHQIVYENYN
KFLTATNTVRKIQDEFTQLDSEMKSLSQSMTTISTLIGNLDGVLGEKRDDILQLGSSYKV
VNSLKHIFDLPHVLQSEFDERNYGEVLRMFKLAEESLEQYKDVPTVQTVLQKSKKIYDMT
ENQLMDQLRNPASGAELVSEAVDLLLTIGRDEDEVQQVLLRCSEQSLREDLKELSSNHSD
VLDLVDKASESFIPNLTLIATTHDRLFEEKRDELLAVLQTEMNSLHALVSKVFLSSMDAK
DCSIVVRALDRYFRKISTCRHVIPGLDFLPLTIELINEVSKHEIDLSLLRIKEELKNSLN
EVRKALINEEKDLSGLASKIEQVFVHQVKTALANLLLFTASDVTFANLPPDEFRQSFALN
AHERLLVQAFHRFAELADEYESGAGETRFIDPRVLLVFSVALQHLSNKSAVYLLNLCREQ
FSLTPEEGLTDISVVTLEVKLRAQKLVRCYAEKTGLSMGETLVKGCTMLVQPAATPSAIR
ASVRRLVEEMNICDSELALLLGGDSKPKEARVSRRPITTALDAARDSLWCERIDFHLQIH
FNRASIITVIVKVVLKIFIESIRLQTYSKFGVEQVQVDCYYLQRCLAALVSDEVVVNSMV
DQALSSALKRCQDPVLVHPSRLAQLCEAPPASANRPSSQASSLGY
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctttttccagtgttttggatgtgacaaaaccggattttgatgtggaagcatat
gtagtgaaattacttcgggaaaaatcgctcgatggattggttaaagaagaggaagaaatg
gtgtcagcagtgcgaagactagattcagatgttcatcaaatagtctatgagaattataat
aaattcctcacagcgacgaatacagtccgaaagattcaagacgagttcacacaactcgat
tcggaaatgaagtcgttgagtcaaagtatgacaacaatatccacactcatcggaaacctt
gacggagttcttggcgagaaacgtgacgatattcttcaacttggaagctcgtataaagtt
gtcaacagtttgaagcatatttttgatcttccgcatgtcttgcagagcgaattcgacgag
agaaactacggagaagtactccgaatgttcaagttagctgaagaatctcttgaacaatac
aaagatgttccaacagttcaaaccgttctacaaaaaagcaagaagatatatgacatgact
gaaaaccagctaatggatcagctacgaaaccccgcctctggcgctgaattagtatctgaa
gctgttgatttgttgctgacgattggaagggacgaagatgaagtacaacaagttttattg
agatgttcagagcaatcattgagagaagatttgaaagaattatcatcaaatcattcggat
gttttggatcttgttgataaggcttcagagagttttattccaaatctcacgttgattgca
acgactcatgatagattatttgaagagaagagagacgaattgctagcggttcttcagacc
gaaatgaactcccttcacgcacttgtttcaaaagtgttcctatcctcaatggacgccaag
gattgttcgatcgtcgtccgagcactcgacagatattttcgtaaaatctccacgtgtcgc
cacgtcatcccgggactcgatttccttccattgaccatagagctcatcaatgaagtatca
aaacatgaaatcgatttatcacttttgagaatcaaggaagaattgaagaattcgttgaat
gaagtaagaaaagcattgatcaatgaggagaaggatctatccggattggcgagcaagatt
gagcaagtttttgttcatcaggttaagaccgccctcgcaaatttactccttttcactgca
agtgacgtcacatttgccaatttgccacctgatgaattccgtcagtcatttgctctcaat
gctcatgaacgtctactcgttcaggcttttcacagatttgcagagcttgctgatgagtac
gaatccggcgccggcgaaacccgtttcattgatccacgtgttcttcttgtattctcggta
gctcttcaacatttatccaacaaatccgccgtctatcttctcaatttatgtcgggaacaa
ttctcattgacccctgaagaaggactgacagatatcagtgtagtcacgttagaagtgaag
ttgagagctcaaaaattggtgagatgctacgcggaaaagacaggattgtcgatgggagag
acactggtgaagggatgtacgatgttggttcaacctgccgcaacgccaagtgcaatacga
gcttcggtccgtcgtcttgtcgaagaaatgaatatatgtgatagtgaattggctctgctt
cttggtggagactcgaaaccaaaggaggcgagagttagccgccgcccgatcaccactgct
ctcgacgctgctcgcgattctctttggtgtgaaagaatcgatttccaccttcagattcat
ttcaaccgcgcctcaatcataaccgttattgtgaaagttgtcctaaagattttcatagaa
tccattcgacttcaaacgtattcgaaatttggtgtggaacaagttcaagtcgattgctat
tacttgcagagatgtctggcagcattggtttcagatgaggttgttgtcaattcgatggta
gatcaagcactctcgtctgctctcaaaagatgtcaggatcccgttctcgtccatccgtcc
cggctggctcaactctgtgaggcacctcctgcgtctgctaatcggccgagttctcaggca
tctagtcttggatattaa
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