KEGG   Caenorhabditis remanei (nematode): GCK72_001084
Entry
GCK72_001084      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14309  nuclear pore complex protein Nup93
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_001084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_001084
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GCK72_001084
SSDB
Motif
Pfam: Nic96 Nup84_Nup100 ANAPC3
Other DBs
NCBI-GeneID: 9801331
NCBI-ProteinID: XP_053591481
UniProt: A0A6A5HMY7
LinkDB
Position
I:complement(6090180..6093936)
AA seq 756 aa
MDGRVDHQDFGQIIRNSLFQAHTEENPNNFTVRSGVEQELCGILGGAEGHWLREQLAVQK
KLMFGERGIEIPSRQAQARSTEETLTEDGIVEVPHAVVDDIDEEELDEDILRVKVETDRA
FFNHMLLARPAAVPMNPAQAMDRDDLPLQNGTFVNKNISDRRELLFGDKLHKFLKSQGKK
SIVELMKEAVEESGTDGALFDVWNDVTSVLNRKTVAGRDDVTTTANLLEDACKYLQKVFT
EHMQTVVERNLEVAERGGVPGTRGLVNAFLKVGTEKSFQPEDDSIDGLPTWQVTYHCVRS
GDMQAAAETLNRLKSFPQCATLVASLNHVAKHKKLDAELKKKLKVEWRHNVGHTKDKYKR
ALYAALLGGLDSAALADTLENWIWFKLHPLHVDPHLTPLLFQEVQKAVSIDYGEQYFMSN
GPSEYQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAILAHKLGYLRMSKKSTDEMLVV
DQNDATKCHLNLARLIVAYTKSFELIDVPRSLDYWFLLRGITTPTGSDVFEMAVSRAVYL
TGQSDAILGKLTPDGRREKGLIDEYLDDPSDVICRVANDTELTGEWDQAVGLYLLASKST
NAAKLLASEISETLRADNKDKIVDLVHVAEQFKRVQKGCQASEYATLSHLIDIGYLFEHC
RNEEAETAYGISSKLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDLCLHLMKCLVDHCIR
QSTTQSNRGGANPHTSMFSSSNRYVKQKLGRHASNN
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggatggtcgcgttgaccatcaagactttggtcaaattatcagaaactctcttttccaa
gcgcacacagaggagaacccaaataacttcactgtacgaagcggtgtcgagcaggagttg
tgtggaattttgggtggtgccgaaggacattggctacgagagcaacttgctgttcaaaag
aaactaatgttcggagagcgtggaattgagattccgagccggcaagcccaggcacgctcc
acagaagaaacacttacagaagacggaattgtggaggttccgcatgcagtggtggatgac
attgatgaggaggagctcgacgaggacattttgcgagtaaaggtcgaaaccgaccgtgca
ttcttcaatcatatgctgttggcaaggccggcagctgttccaatgaatccagcacaagct
atggatagagatgaccttccactccaaaacggaacatttgttaacaaaaacattagcgat
cgtcgggaactgctcttcggagataaacttcacaagtttttgaaaagtcaaggtaaaaag
agtatcgtggagcttatgaaagaagctgtcgaggaaagtggaacagatggagccctattt
gatgtctggaatgatgtcacttcagttttgaatagaaaaactgttgctggtcgagatgat
gtcaccacaactgcaaatttgctggaagatgcgtgtaaatatcttcaaaaagtattcact
gaacacatgcaaacagtggttgagagaaatttggaagttgctgaaagaggaggagtccca
ggaacgagaggattggttaacgcttttttaaaggtaggaaccgaaaaatcgttccaacca
gaagacgatagtatcgatggtctcccgacatggcaagtgacttatcattgtgttcgttcc
ggcgatatgcaagctgctgctgaaactctcaatcgtctgaaatcattcccacagtgcgca
acactcgttgcctcactgaatcacgtggcaaaacataagaaattggatgctgaattgaag
aagaagttgaaagtcgagtggagacataatgttggacacacgaaggataaatacaagaga
gctctgtatgctgcattactgggaggtctcgattcggcagcacttgcggatacattggag
aattggatttggttcaaactgcatccacttcatgttgatccccatttgacaccattgttg
ttccaggaggttcagaaggcggtgtcgattgactacggagagcagtatttcatgtcaaat
ggtccatctgagtaccagtatttcttcacggctctctggctctctggacagtttgaaaga
gcgatttatttgcttcacgaatgcggacaacgggtggacagtgtacatgtagcgattttg
gctcacaaactcgggtatctgagaatgtcgaaaaagtcgacagatgagatgttagtcgtc
gatcaaaacgatgcgaccaaatgtcacctgaatcttgcccgtctcattgtcgcttacacg
aaaagttttgaactgattgacgtgccacgatccctggattattggttccttttgagagga
atcaccactccaacgggatcagatgtgttcgagatggctgttagtcgagcagtttatttg
acaggacagtctgatgcgattctcggaaaactgacacccgatggaagacgagagaaggga
ttaattgatgaatacttggacgatccatcagatgttatttgtcgtgttgcaaacgatacg
gaattgacaggtgaatgggatcaagctgttggtctttatctccttgcctccaaatctacg
aatgctgccaaattacttgcatcggaaatcagcgagactcttcgtgcagataacaaggac
aaaattgttgatttggttcatgtggccgaacaattcaaacgagttcaaaaaggatgtcaa
gcatctgaatacgccactttgtcacatctcatcgatattggatatctgtttgagcattgc
cgaaatgaggaagccgagactgcttacggaatctcgtcaaaactgcgtcttatcccaact
gaaccggatcaagtaactgtcatcgtcaacgaattccatatggttccacaaaaagttcgt
gaagttctgccagacctgtgcctccatctcatgaagtgtcttgtcgatcactgcattcgc
cagtccacaactcaatcgaatcgtggtggtgccaacccccatacttctatgttctcctct
tcgaatcgctacgtgaagcagaaattgggtagacacgcttcgaacaactga

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