Caenorhabditis remanei (nematode): GCK72_001084
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Entry
GCK72_001084 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_001084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_001084
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GCK72_001084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
ANAPC3
Motif
Other DBs
NCBI-GeneID:
9801331
NCBI-ProteinID:
XP_053591481
UniProt:
A0A6A5HMY7
LinkDB
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Position
I:complement(6090180..6093936)
Genome browser
AA seq
756 aa
AA seq
DB search
MDGRVDHQDFGQIIRNSLFQAHTEENPNNFTVRSGVEQELCGILGGAEGHWLREQLAVQK
KLMFGERGIEIPSRQAQARSTEETLTEDGIVEVPHAVVDDIDEEELDEDILRVKVETDRA
FFNHMLLARPAAVPMNPAQAMDRDDLPLQNGTFVNKNISDRRELLFGDKLHKFLKSQGKK
SIVELMKEAVEESGTDGALFDVWNDVTSVLNRKTVAGRDDVTTTANLLEDACKYLQKVFT
EHMQTVVERNLEVAERGGVPGTRGLVNAFLKVGTEKSFQPEDDSIDGLPTWQVTYHCVRS
GDMQAAAETLNRLKSFPQCATLVASLNHVAKHKKLDAELKKKLKVEWRHNVGHTKDKYKR
ALYAALLGGLDSAALADTLENWIWFKLHPLHVDPHLTPLLFQEVQKAVSIDYGEQYFMSN
GPSEYQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAILAHKLGYLRMSKKSTDEMLVV
DQNDATKCHLNLARLIVAYTKSFELIDVPRSLDYWFLLRGITTPTGSDVFEMAVSRAVYL
TGQSDAILGKLTPDGRREKGLIDEYLDDPSDVICRVANDTELTGEWDQAVGLYLLASKST
NAAKLLASEISETLRADNKDKIVDLVHVAEQFKRVQKGCQASEYATLSHLIDIGYLFEHC
RNEEAETAYGISSKLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDLCLHLMKCLVDHCIR
QSTTQSNRGGANPHTSMFSSSNRYVKQKLGRHASNN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggatggtcgcgttgaccatcaagactttggtcaaattatcagaaactctcttttccaa
gcgcacacagaggagaacccaaataacttcactgtacgaagcggtgtcgagcaggagttg
tgtggaattttgggtggtgccgaaggacattggctacgagagcaacttgctgttcaaaag
aaactaatgttcggagagcgtggaattgagattccgagccggcaagcccaggcacgctcc
acagaagaaacacttacagaagacggaattgtggaggttccgcatgcagtggtggatgac
attgatgaggaggagctcgacgaggacattttgcgagtaaaggtcgaaaccgaccgtgca
ttcttcaatcatatgctgttggcaaggccggcagctgttccaatgaatccagcacaagct
atggatagagatgaccttccactccaaaacggaacatttgttaacaaaaacattagcgat
cgtcgggaactgctcttcggagataaacttcacaagtttttgaaaagtcaaggtaaaaag
agtatcgtggagcttatgaaagaagctgtcgaggaaagtggaacagatggagccctattt
gatgtctggaatgatgtcacttcagttttgaatagaaaaactgttgctggtcgagatgat
gtcaccacaactgcaaatttgctggaagatgcgtgtaaatatcttcaaaaagtattcact
gaacacatgcaaacagtggttgagagaaatttggaagttgctgaaagaggaggagtccca
ggaacgagaggattggttaacgcttttttaaaggtaggaaccgaaaaatcgttccaacca
gaagacgatagtatcgatggtctcccgacatggcaagtgacttatcattgtgttcgttcc
ggcgatatgcaagctgctgctgaaactctcaatcgtctgaaatcattcccacagtgcgca
acactcgttgcctcactgaatcacgtggcaaaacataagaaattggatgctgaattgaag
aagaagttgaaagtcgagtggagacataatgttggacacacgaaggataaatacaagaga
gctctgtatgctgcattactgggaggtctcgattcggcagcacttgcggatacattggag
aattggatttggttcaaactgcatccacttcatgttgatccccatttgacaccattgttg
ttccaggaggttcagaaggcggtgtcgattgactacggagagcagtatttcatgtcaaat
ggtccatctgagtaccagtatttcttcacggctctctggctctctggacagtttgaaaga
gcgatttatttgcttcacgaatgcggacaacgggtggacagtgtacatgtagcgattttg
gctcacaaactcgggtatctgagaatgtcgaaaaagtcgacagatgagatgttagtcgtc
gatcaaaacgatgcgaccaaatgtcacctgaatcttgcccgtctcattgtcgcttacacg
aaaagttttgaactgattgacgtgccacgatccctggattattggttccttttgagagga
atcaccactccaacgggatcagatgtgttcgagatggctgttagtcgagcagtttatttg
acaggacagtctgatgcgattctcggaaaactgacacccgatggaagacgagagaaggga
ttaattgatgaatacttggacgatccatcagatgttatttgtcgtgttgcaaacgatacg
gaattgacaggtgaatgggatcaagctgttggtctttatctccttgcctccaaatctacg
aatgctgccaaattacttgcatcggaaatcagcgagactcttcgtgcagataacaaggac
aaaattgttgatttggttcatgtggccgaacaattcaaacgagttcaaaaaggatgtcaa
gcatctgaatacgccactttgtcacatctcatcgatattggatatctgtttgagcattgc
cgaaatgaggaagccgagactgcttacggaatctcgtcaaaactgcgtcttatcccaact
gaaccggatcaagtaactgtcatcgtcaacgaattccatatggttccacaaaaagttcgt
gaagttctgccagacctgtgcctccatctcatgaagtgtcttgtcgatcactgcattcgc
cagtccacaactcaatcgaatcgtggtggtgccaacccccatacttctatgttctcctct
tcgaatcgctacgtgaagcagaaattgggtagacacgcttcgaacaactga
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