Caenorhabditis remanei (nematode): GCK72_001112
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Entry
GCK72_001112 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCK72_001112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_001112
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_001112
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GCK72_001112
Coactivators
SAGA/TFTC/STAGA complex
GCK72_001112
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
GCK72_001112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFH
TAF4
Motif
Other DBs
NCBI-GeneID:
9801945
NCBI-ProteinID:
XP_003111384
UniProt:
E3LXZ0
A0A6A5HNV6
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All DBs
Position
I:complement(<6202509..>6204907)
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AA seq
553 aa
AA seq
DB search
MSLPRFRLVQGKALGERSTPPVGANMTPEPPQPQIKQEVEYNADTPEQSIQNIKTESPVS
PQQQVMGGTPQPPLMMNQRPIQQMHYQPQPQPQHQPQHQPQPQHQPQPQPQPQPQPPQQF
PQMIPPNQNQAAQNISAEERNVQKCVRFLKTLISLSNNVDAEMPDKAARVKNLIQGVIYM
ETTAEEFTQDLQQVLKSQAQPHLLPFLQNTLPALRNAVRNGSASVEDVHPPPGYVFNNGR
VPLPQLPPHPQISQQSHTPMAIQQPIGSQQIINRLNGPVIQQRPPLNNGPPLQSTPQIPV
VRTMSGQAGPMALGQIPSGPQQMTPIPQQTAPQTPQNLQNSMPPSGPVPMEVDPEPARTR
QYPEGSLKSSILKPDEVLNRITKRMMASCSVEEEALIAISDAVESHLREMITMMAGVAEH
RVESMRIPDNYMAIDDVKRQLRFLEDLDRQEEEMRESREKESLIRMSKNKNSGKETIEKA
KEMQRQDAEAKRNRDANAAAIAALSTNRTVKNKWEGASSASTAPRPRTVRVTTRDLHLLV
NQDNRFNGFVYYR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcctcgatttcgtctagtacaaggaaaagcgctgggcgaacggtccacgcca
ccagtaggagccaatatgacaccggaaccgcctcagccacagataaaacaggaggtagaa
tataatgcagacactccggagcaaagcattcaaaatatcaagacagaaagcccagtttca
ccccaacaacaagtcatgggtggaactccgcaacccccactgatgatgaatcaacgacct
atacaacaaatgcattatcaacctcaacctcaacctcaacatcaaccccaacatcaacca
caacctcaacatcaaccccaacctcaacctcaacctcaacctcaaccacctcagcaattc
cctcaaatgatacctccaaaccagaatcaagcagctcaaaacatatccgctgaagagaga
aacgttcaaaaatgtgttcgatttttgaaaacactaatcagtttgtcgaataatgtagat
gcagagatgccagacaaggcggcaagagtaaaaaatttgatccagggtgtaatctacatg
gaaacgacagctgaagaattcactcaagatcttcaacaggtcctcaagtcacaagcacaa
ccacatcttctaccattccttcagaacacacttccagctttgagaaatgctgtgagaaat
ggaagtgccagtgtagaagatgttcatcccccacccggatacgttttcaacaatggacgt
gttccacttccacaacttcctccacatccacaaatttcacaacaatcgcatacaccaatg
gcaattcagcaaccaattggttcccaacaaataatcaatcgattgaatggtccagttata
cagcagagacctccactgaacaacggaccaccacttcaatcgactcctcagattccagtt
gttcgtacgatgagtggacaagcaggaccaatggctctagggcaaataccttctggacca
caacagatgacaccgattccacaacaaactgcaccacagactcctcaaaatcttcagaat
tctatgcccccgtccggtccggttccaatggaagtagatccggagccggcgagaacacga
cagtatcccgaaggatcactgaaatcatcgattctaaaaccagacgaggttctcaacagg
atcactaaacgaatgatggcatcatgttctgtggaagaggaggcactcattgcaatttca
gatgcagtggaatcacacttgcgggagatgataacgatgatggctggggtggcagaacat
cgtgttgagtcgatgagaattcctgataattacatggcaattgatgatgtaaaacgacaa
cttcgatttttggaagatttggatcgacaagaggaggaaatgagagaatcgagagaaaaa
gaatcattgatccgaatgagtaaaaataagaattctggaaaagagacgattgaaaaagca
aaagaaatgcagaggcaagatgctgaagcgaaacgaaatcgtgatgcaaatgcagctgca
attgcagcattgtcaaccaatcgaacggttaagaataaatgggaaggagcgtcgtcagca
tcaactgcaccacgcccacgcactgttcgagtaaccactcgtgatcttcaccttctagtc
aatcaggataatcgatttaatgggttcgtttactatcgatga
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