Caenorhabditis remanei (nematode): GCK72_001244
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Entry
GCK72_001244 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04120
Ubiquitin mediated proteolysis
crq04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GCK72_001244
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GCK72_001244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_001244
04121 Ubiquitin system [BR:
crq04121
]
GCK72_001244
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_001244
Enzymes [BR:
crq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
GCK72_001244
Membrane trafficking [BR:
crq04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
GCK72_001244
Ubiquitin system [BR:
crq04121
]
Ubiquitin ligases (E3)
HECT type E3
GCK72_001244
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
GCK72_001244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
9801319
NCBI-ProteinID:
XP_003111409
UniProt:
E3LXJ9
A0A6A5HSW6
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All DBs
Position
I:6614188..6619787
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AA seq
747 aa
AA seq
DB search
MVVQTVVHGYPSTTDNETELLRVRLLRGTKLGKRDLFGVCSPYCLVRLENSNGDIVDEVQ
VETKRKTRNPTWNSVFTFRVTRSCHLKILVYDENRLRKDSLMGSVGKALDDGRISTQAPN
PEEFPLQAGSSGKGKSIGSLFLSFHFMPSSTDNSPNDSTNDLQQTTSGMPQGWEEREDGN
GRTVYINHALRTTQFTPPESIPNGNTDAITEQSVIEETRRRRDNYEHRSQVTDEPSDTTV
VSNELTAIDDAMRANFEHGGGHEEEEEEDELRLPDGWDMQVAPNGRTFFIDHRTKTTTWT
DPRTGVAARLPVRGKTDDEIGALPPGWEQRVHVDGRVFFIDHNRRRTQWEDPRFENENIA
GPAVPYSRDYKRKVEYLRSRLPKPNSNSGKCDMVVHRDTLFEDSYRHIMDKKDYDLRNKL
WIEFFGETGLDYGGVTREWFFLLSHQIFNPYYGLFEYSATDNYTLQINPHSEACNPEHLS
YFHFIGRIIGMAIYHGKLLDAFFIRPFYKMMLGKKITLFDMESVDNAYYNSLIYVKDNDP
ADLELTFSLDDSIFGETQNVELIPDGANIAVTEENKEQYIEAVISWRFVNRIEKQMNQIL
KGVQEVVPSNLLRLFDANELELLMCGLQKIDVKDWKANTIYKGGYGPSSQVVHNFWKCIL
SFDNEMRARVLQFVSGTSRVPMNGFRELYGSNGLQKFTIERWGSADMLPRAHTCFNRLDL
PPYTTFKELKSKLLTAIENSEIFSGVD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtacagactgttgttcatggatatccatcaactactgataatgaaacagaactt
ctacgggtccgattgttgcgtggtacaaaactcgggaaacgtgacttgtttggtgtctgc
tcaccgtattgtttggttcgtttagagaattcgaatggagatattgttgatgaagtacag
gtggagacaaagagaaagaccagaaatccaacgtggaacagtgtgtttacattccgagta
acacgttcttgtcacctgaaaatattagtttacgatgagaatcgattgagaaaagattct
ttgatgggatctgtggggaaggcgctggatgacggaagaatctcaacacaagcaccgaat
ccagaagaatttccattgcaagccgggtcgtcggggaagggaaaaagcattggttccctc
ttcctgagttttcattttatgccatcatcaactgataactctccaaatgattctacaaat
gatttacaacaaacgacaagtggaatgcctcaaggatgggaagaaagagaagatggaaat
ggaagaacggtttatattaatcatgctctcagaacaactcaattcactcctcctgaaagt
attccaaatggcaatactgacgccatcacggaacaatcagttatcgaggagacgcgtcgt
cgtcgtgacaactacgagcatcggagtcaagtcactgatgagccatccgatacgacagtc
gttagtaacgagttgaccgcgattgacgacgcgatgcgagcgaacttcgaacatggcggt
ggacacgaagaagaagaagaagaagacgagttgagactcccagatggatgggatatgcaa
gtagcacctaatggacgtacattcttcattgatcatcgcacaaaaacgacaacatggaca
gatccacgaacaggagtggcagctagactaccggttcgaggaaagactgatgacgagata
ggagcattacctccaggatgggaacaacgagttcatgtcgatggacgtgtcttctttatt
gatcataatagaaggcggacgcaatgggaagatcctagatttgagaatgaaaatattgct
ggaccagctgtaccgtattccagagattataagagaaaggttgaatatcttcgctcccgt
cttccgaaacctaatagtaatagtgggaaatgtgatatggttgttcatcgtgatacactt
ttcgaggattcatatcgacatattatggataagaaagactacgacttacgcaataaatta
tggatcgagttctttggagagactggactggattatggtggtgtcacaagagagtggttc
tttttactttctcatcaaatattcaacccgtattatggacttttcgagtactctgccact
gataactacactcttcaaatcaatccacactcggaagcatgtaatccagaacatctatcc
tatttccatttcataggaagaatcatcggaatggcaatctatcatggaaaactactcgat
gcctttttcattcgtccattttataagatgatgttgggcaaaaagatcactcttttcgat
atggaatcagttgacaatgcatattataactcgttgatttatgtcaaagataatgatcca
gccgatttggagctcactttctcattagatgactcgattttcggagagactcaaaacgtg
gaattgattcctgacggagcgaatattgcagtgacagaagagaacaaggaacagtatatt
gaggcggtgattagttggagatttgtgaatcgaatcgagaaacagatgaatcagattctg
aaaggagtacaagaggtcgtcccatcgaatcttctccggctctttgatgccaatgaactc
gaattattgatgtgtggacttcagaagattgatgtgaaagactggaaagcgaatacaatt
tacaagggaggatatggaccaagcagtcaagtagttcacaatttctggaaatgcattcta
tcatttgataatgaaatgagagcaagagtacttcaattcgtatctggaacatctcgagta
cctatgaacggattcagagaattgtatggatcaaatggtcttcagaagtttacaatcgaa
agatggggtagtgctgacatgttgccgagggctcatacttgcttcaatcgtctcgatttg
ccaccatacaccacgttcaaagagctcaaatcgaaactattaacggctattgaaaactcg
gaaattttctcgggagtcgattaa
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