KEGG   Caenorhabditis remanei (nematode): GCK72_001379
Entry
GCK72_001379      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K13203  zinc finger RNA-binding protein
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_001379
Spliceosome [BR:crq03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    GCK72_001379
SSDB
Motif
Pfam: zf-met DZF_C zf-C2H2_jaz DZF_N zf-C2H2 C2H2-zf_KIN17 Med23
Other DBs
NCBI-GeneID: 9816199
NCBI-ProteinID: XP_053591583
UniProt: A0A6A5HUX6
LinkDB
Position
I:7198264..7202218
AA seq 873 aa
MYGGYQGAYGAYGSQQYAAAANAANAANRANAYQQGHPQPAQNYYTGVNPYANYGYGGVN
APLPPPPPPPPAPQTNYGSTYSSFPSQATKMTAPSAYFKKAQSTPSNQGAFNGYDAAVYN
YAQQTTQSAQNTANHIGATWNNTTGGAAGRNNKQSSGDNNMFYCETCKVSCAGAITYREH
LDGKGHKKREECLKTGKHPVSLAKHKLSYRCELCDVTCTGQDTYNAHIKGGKHIKTANLH
KKMGKYVPEDVPTIIAPGVDGPIETKAKPKWHQQQIPGTKKVIGINTVQFVGGHKLNSTG
QLEEKKRVVALTVGSAGKKEDSGMEPIIVEDEMLQAMIVAEEIQPVGAEYVMEDRDATGK
LVQFHCKLCDCKFSDPNAKEIHIKGRRHRMSYKQQVDPTLIVDQKPSNKKSDKGAKKGMD
YLPMKFKCTVVPPTPKGREMNIVDDRTVDQKYQSLHPGKEYNDNIDRFLADVKSCFKMVS
DKIGEVSGESTSESEVTTAQTPTNGKTNNPRILIGCIRCGPFSKKTYIKADAYADMVLTC
TPLPTPELVQRMTDTFREVSTDLTIESDPTSGVCVIISANYFPELKCRVMITSPSLRSEE
DSEGAKSEFPEKAMCLNALAMMRSTKWYENHCLYLNSCHQVIRLIRDLRSRHAVWESLND
HQLELLVSNVIDSTPSVLNPAEAFKRVIEAISSGYLHSAILNDPCESTSINVLDALSDEQ
KHSLTCSAQSFIRKIGFNKIHEVLGIDRLVDVAPGIPTKKRPFDTSSRDVIGEMYDEMLG
YDGPVIDPRPPGVGKDFVEEDYAGIDQDDGEPQAKRGKLDDFIEEQKMDTTKEEANLATE
TVELMSTEEEERNVADPVKPDKSEAAEPMEEFV
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgtatgggggatatcaaggagcctatggggcctacggaagtcaacagtatgccgcagct
gccaatgcggctaatgctgctaatagagccaatgcatatcaacagggacatccacaaccg
gctcaaaattattatacaggggtaaatccatatgcaaattacggttatggtggagttaat
gcgcccttgccaccaccgccgccaccgccaccggctccacaaacgaactatggatcaact
tattcatcattcccatcacaggcaacaaaaatgacagctcccagcgcttatttcaaaaaa
gcacaaagtacaccatcaaatcaaggtgcattcaatggatatgatgcagcagtatataat
tatgctcaacaaacaacacagagtgctcaaaatacagcaaatcacattggtgccacgtgg
aataatacaacgggtggagcagctggtagaaacaataaacaatcatctggtgataataat
atgttctactgtgagacgtgcaaagtgtcatgtgcgggtgcaataacttatagagagcac
ttagatggaaaaggacataagaagagagaagaatgtttgaaaacaggaaaacatcccgtt
tcattggcaaaacataaactatcatatcggtgtgagttgtgcgatgtaacttgtactgga
caagacacctacaatgctcatataaaaggaggaaaacatataaaaacggcaaatttacac
aagaaaatgggaaaatatgtgccagaagatgttccaacaataattgcacctggcgtagat
ggtcctattgagacgaaagccaaaccaaagtggcatcaacaacaaattcctggaacaaaa
aaagttattggtatcaacactgtgcagttcgtgggcggccataaactcaactccactgga
caacttgaggaaaagaagcgagtagtagcgctgacggttggatccgctggaaaaaaggag
gactcaggaatggagccaatcatagtagaagatgaaatgttgcaagcaatgattgtagct
gaagaaatacaaccagttggagcagaatatgttatggaggaccgggatgcaaccggaaag
ttagttcagttccattgtaaactgtgcgactgcaaattttcggatccaaatgctaaagaa
atacacattaaaggaagacgtcatcgaatgagttataaacaacaagttgatccaactctt
atagtagaccaaaaaccttcaaacaaaaaatcagacaaaggagccaaaaaagggatggac
tacttaccaatgaaattcaaatgcaccgtcgttccgcccactcctaaaggccgagaaatg
aatatcgttgatgatagaactgtagatcaaaaatatcaatcactacatcctggaaaggaa
tacaacgataatatcgatcgattcttggcagatgtgaagagctgtttcaaaatggtttca
gacaaaataggagaagtttctggagaatcaacttctgaatcggaagttaccacagctcag
acgcctacgaatggaaaaacaaataacccccgtattttgataggttgcatcagatgtgga
cctttctcgaagaagacttacatcaaggcagacgcatatgcagatatggttcttacgtgt
actccactgccaactccagaattggttcaaagaatgacagacacatttagagaagtttcg
acggatctaactattgaatccgaccctacatctggagtttgtgtaattatctctgccaac
tatttcccagaattgaaatgtcgtgtaatgataacatctccgtcactcagaagcgaagaa
gattcagaaggtgccaaatcagaattcccagaaaaagccatgtgtctgaatgcattagct
atgatgcggagcacgaaatggtatgagaatcattgcctatatttaaattcttgtcaccaa
gtaattcgtctgattcgtgatctccgtagccgacacgcagtttgggaaagtctgaatgat
caccaacttgaactgctcgtctccaacgtcattgactctactccgtcagtcttgaatccg
gccgaagcattcaaacgagttattgaagctatttcatccggttatcttcattcggctatt
ctaaatgacccatgcgaatcgacaagcataaatgtcttggatgctttgagtgatgaacag
aaacactcattgacctgctcggcacaatcgttcattcgaaaaataggtttcaataaaatc
catgaggttcttggaatcgatcgactcgtggatgttgcgccaggtattccaacaaagaaa
cgtccattcgatacttctagcagagatgtgatcggagagatgtatgatgagatgttagga
tacgatggtccggttattgacccacggccacccggagtaggaaaagactttgttgaggaa
gactatgcaggaattgatcaggacgatggagagccacaagcgaaaagaggaaaactcgac
gattttattgaggaacagaaaatggatacaacgaaagaagaagcaaatttggctacggag
actgtagagctaatgtcaacagaagaagaagaacgtaacgtggcggacccagtaaagcca
gataaatcagaggccgctgaaccaatggaagaatttgtgtaa

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