Caenorhabditis remanei (nematode): GCK72_001379
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Entry
GCK72_001379 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13203
zinc finger RNA-binding protein
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_001379
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
GCK72_001379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
DZF_C
zf-C2H2_jaz
DZF_N
zf-C2H2
C2H2-zf_KIN17
Med23
Motif
Other DBs
NCBI-GeneID:
9816199
NCBI-ProteinID:
XP_053591583
UniProt:
A0A6A5HUX6
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Position
I:7198264..7202218
Genome browser
AA seq
873 aa
AA seq
DB search
MYGGYQGAYGAYGSQQYAAAANAANAANRANAYQQGHPQPAQNYYTGVNPYANYGYGGVN
APLPPPPPPPPAPQTNYGSTYSSFPSQATKMTAPSAYFKKAQSTPSNQGAFNGYDAAVYN
YAQQTTQSAQNTANHIGATWNNTTGGAAGRNNKQSSGDNNMFYCETCKVSCAGAITYREH
LDGKGHKKREECLKTGKHPVSLAKHKLSYRCELCDVTCTGQDTYNAHIKGGKHIKTANLH
KKMGKYVPEDVPTIIAPGVDGPIETKAKPKWHQQQIPGTKKVIGINTVQFVGGHKLNSTG
QLEEKKRVVALTVGSAGKKEDSGMEPIIVEDEMLQAMIVAEEIQPVGAEYVMEDRDATGK
LVQFHCKLCDCKFSDPNAKEIHIKGRRHRMSYKQQVDPTLIVDQKPSNKKSDKGAKKGMD
YLPMKFKCTVVPPTPKGREMNIVDDRTVDQKYQSLHPGKEYNDNIDRFLADVKSCFKMVS
DKIGEVSGESTSESEVTTAQTPTNGKTNNPRILIGCIRCGPFSKKTYIKADAYADMVLTC
TPLPTPELVQRMTDTFREVSTDLTIESDPTSGVCVIISANYFPELKCRVMITSPSLRSEE
DSEGAKSEFPEKAMCLNALAMMRSTKWYENHCLYLNSCHQVIRLIRDLRSRHAVWESLND
HQLELLVSNVIDSTPSVLNPAEAFKRVIEAISSGYLHSAILNDPCESTSINVLDALSDEQ
KHSLTCSAQSFIRKIGFNKIHEVLGIDRLVDVAPGIPTKKRPFDTSSRDVIGEMYDEMLG
YDGPVIDPRPPGVGKDFVEEDYAGIDQDDGEPQAKRGKLDDFIEEQKMDTTKEEANLATE
TVELMSTEEEERNVADPVKPDKSEAAEPMEEFV
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggggatatcaaggagcctatggggcctacggaagtcaacagtatgccgcagct
gccaatgcggctaatgctgctaatagagccaatgcatatcaacagggacatccacaaccg
gctcaaaattattatacaggggtaaatccatatgcaaattacggttatggtggagttaat
gcgcccttgccaccaccgccgccaccgccaccggctccacaaacgaactatggatcaact
tattcatcattcccatcacaggcaacaaaaatgacagctcccagcgcttatttcaaaaaa
gcacaaagtacaccatcaaatcaaggtgcattcaatggatatgatgcagcagtatataat
tatgctcaacaaacaacacagagtgctcaaaatacagcaaatcacattggtgccacgtgg
aataatacaacgggtggagcagctggtagaaacaataaacaatcatctggtgataataat
atgttctactgtgagacgtgcaaagtgtcatgtgcgggtgcaataacttatagagagcac
ttagatggaaaaggacataagaagagagaagaatgtttgaaaacaggaaaacatcccgtt
tcattggcaaaacataaactatcatatcggtgtgagttgtgcgatgtaacttgtactgga
caagacacctacaatgctcatataaaaggaggaaaacatataaaaacggcaaatttacac
aagaaaatgggaaaatatgtgccagaagatgttccaacaataattgcacctggcgtagat
ggtcctattgagacgaaagccaaaccaaagtggcatcaacaacaaattcctggaacaaaa
aaagttattggtatcaacactgtgcagttcgtgggcggccataaactcaactccactgga
caacttgaggaaaagaagcgagtagtagcgctgacggttggatccgctggaaaaaaggag
gactcaggaatggagccaatcatagtagaagatgaaatgttgcaagcaatgattgtagct
gaagaaatacaaccagttggagcagaatatgttatggaggaccgggatgcaaccggaaag
ttagttcagttccattgtaaactgtgcgactgcaaattttcggatccaaatgctaaagaa
atacacattaaaggaagacgtcatcgaatgagttataaacaacaagttgatccaactctt
atagtagaccaaaaaccttcaaacaaaaaatcagacaaaggagccaaaaaagggatggac
tacttaccaatgaaattcaaatgcaccgtcgttccgcccactcctaaaggccgagaaatg
aatatcgttgatgatagaactgtagatcaaaaatatcaatcactacatcctggaaaggaa
tacaacgataatatcgatcgattcttggcagatgtgaagagctgtttcaaaatggtttca
gacaaaataggagaagtttctggagaatcaacttctgaatcggaagttaccacagctcag
acgcctacgaatggaaaaacaaataacccccgtattttgataggttgcatcagatgtgga
cctttctcgaagaagacttacatcaaggcagacgcatatgcagatatggttcttacgtgt
actccactgccaactccagaattggttcaaagaatgacagacacatttagagaagtttcg
acggatctaactattgaatccgaccctacatctggagtttgtgtaattatctctgccaac
tatttcccagaattgaaatgtcgtgtaatgataacatctccgtcactcagaagcgaagaa
gattcagaaggtgccaaatcagaattcccagaaaaagccatgtgtctgaatgcattagct
atgatgcggagcacgaaatggtatgagaatcattgcctatatttaaattcttgtcaccaa
gtaattcgtctgattcgtgatctccgtagccgacacgcagtttgggaaagtctgaatgat
caccaacttgaactgctcgtctccaacgtcattgactctactccgtcagtcttgaatccg
gccgaagcattcaaacgagttattgaagctatttcatccggttatcttcattcggctatt
ctaaatgacccatgcgaatcgacaagcataaatgtcttggatgctttgagtgatgaacag
aaacactcattgacctgctcggcacaatcgttcattcgaaaaataggtttcaataaaatc
catgaggttcttggaatcgatcgactcgtggatgttgcgccaggtattccaacaaagaaa
cgtccattcgatacttctagcagagatgtgatcggagagatgtatgatgagatgttagga
tacgatggtccggttattgacccacggccacccggagtaggaaaagactttgttgaggaa
gactatgcaggaattgatcaggacgatggagagccacaagcgaaaagaggaaaactcgac
gattttattgaggaacagaaaatggatacaacgaaagaagaagcaaatttggctacggag
actgtagagctaatgtcaacagaagaagaagaacgtaacgtggcggacccagtaaagcca
gataaatcagaggccgctgaaccaatggaagaatttgtgtaa
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